Factsheet for TraesCS4A01G145300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	99.26	99.08
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	93.7	98.83
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	85.93	85.77
Zm00001d048732_P005	Maize	plasma membrane	86.48	85.53
Os11t0648000-01	Rice	plasma membrane	86.3	85.5
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	97.41	81.55
GSMUA_Achr8P06790_001	Banana	plasma membrane	72.59	72.86
GSMUA_Achr3P23840_001	Banana	plasma membrane	72.22	72.63
VIT_05s0020g01960.t01	Wine grape	plasma membrane	72.22	72.09
TraesCS2A01G121000.1	Wheat	plasma membrane	71.3	71.56
Solyc01g067710.2.1	Tomato	plasma membrane	71.11	71.51
PGSC0003DMT400027658	Potato	plasma membrane	70.93	71.32
KRH02192	Soybean	plasma membrane	70.19	70.71
VIT_07s0104g01280.t01	Wine grape	plasma membrane	65.0	70.34
TraesCS1A01G102300.1	Wheat	plasma membrane	70.19	69.41
GSMUA_Achr2P01560_001	Banana	plasma membrane	67.41	67.66
GSMUA_Achr6P20250_001	Banana	plasma membrane	69.63	65.62
Solyc06g008820.2.1	Tomato	plasma membrane	64.44	65.17
PGSC0003DMT400056555	Potato	plasma membrane	30.37	65.08
AT3G06370.3	Thale cress	plasma membrane	66.11	64.67
PGSC0003DMT400056556	Potato	golgi, plasma membrane	36.11	63.73
CDY24699	Canola	plasma membrane	65.56	63.44
CDY05257	Canola	plasma membrane	65.74	63.39
Bra020755.1-P	Field mustard	plasma membrane	63.33	63.33
KRH50930	Soybean	mitochondrion	70.0	60.0
TraesCS7A01G228400.1	Wheat	plasma membrane	55.37	56.74
Zm00001d028330_P048	Maize	plasma membrane	55.19	55.19
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	48.52	37.22
Zm00001d048459_P007	Maize	plasma membrane	32.22	36.33
Zm00001d025052_P007	Maize	plasma membrane	29.26	30.38
Zm00001d021844_P003	Maize	mitochondrion	51.11	29.39
TraesCS5A01G176100.3	Wheat	plasma membrane	27.59	27.85
TraesCS7A01G242300.1	Wheat	plasma membrane	27.59	27.49
TraesCS5A01G260700.1	Wheat	plasma membrane	26.85	27.26
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	35.19	24.11

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0008150
GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038770
InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF154
TIGRFAMs:TIGR00840	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G145300	EnsemblPlants:TraesCS4A01G145300.1	SEG:seg	:

Description

No Description!

Coordinates

chr4A:-:246710054..246714054

Molecular Weight (calculated)

59249.0 Da

IEP (calculated)

8.547

GRAVY (calculated)

0.549

Length

540 amino acids

Sequence
(BLAST)

001: MGLGLGDPPA DYGSIMAVGL FVALMCICII VGHLLEENRW MNESTTALLL GLGAGTVILF ASSGKNSRLM VFSEDLFFIY LLPPIIFNAG FQVKKKQFFR
101: NFMTITLFAV VGTLISFSII SLGAMGLISR LNIGSLELGD YLALGAIFSA TDSVCTLQVL NQDETPFLYS LVFGEGVVND ATSVVLFNAI QNFDLGNFSS
201: LKFLQFIGNF LYLFGASTFL GVASGLLSAY VIKKLYFGRH STDREVAIMM LMAYLSYMLA ELLDLSGILT VFFCGIVMSH YTWHNVTESS RVTTKHAFAT
301: LSFISETFLF LYVGMDALDI EKWKIVSETY SPMKSIGLSS IIVALVLVAR AAFVFPLSYL SNLTKTTPGE KISIRQQVII WWAGLMRGAV SIALAYNKFA
401: KSGHTQLPSN AIMITSTIII VLFSTIVFGL LTKPLIRLLI PARHLTREVS ALSEPSSPKS FLEQLPGNGP ETDLENAVSI RRPTSLRMLL ASPTRSVHHY
501: WRKFDNAFMR PVFGGRGFVP FVPGSPTESS VPLLAHGSEN

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.