Factsheet for Zm00001d048732_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 4
plasma membrane 5
vacuole 3
golgi 3
extracellular 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	94.14	95.01
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	86.08	86.88
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	81.32	86.72
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.53	86.48
Os11t0648000-01	Rice	plasma membrane	84.8	84.95
Zm00001d022504_P001	Maize	plasma membrane	72.71	73.65
GSMUA_Achr8P06790_001	Banana	plasma membrane	71.98	73.05
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	86.08	72.87
GSMUA_Achr3P23840_001	Banana	plasma membrane	71.61	72.81
PGSC0003DMT400027658	Potato	plasma membrane	70.51	71.69
Solyc01g067710.2.1	Tomato	plasma membrane	70.33	71.51
VIT_05s0020g01960.t01	Wine grape	plasma membrane	70.15	70.79
KRH02192	Soybean	plasma membrane	68.86	70.15
VIT_07s0104g01280.t01	Wine grape	plasma membrane	63.92	69.94
Zm00001d024832_P002	Maize	plasma membrane	70.15	68.52
GSMUA_Achr2P01560_001	Banana	plasma membrane	65.93	66.91
GSMUA_Achr6P20250_001	Banana	plasma membrane	69.23	65.97
PGSC0003DMT400056555	Potato	plasma membrane	30.22	65.48
Solyc06g008820.2.1	Tomato	plasma membrane	63.55	64.98
AT3G06370.3	Thale cress	plasma membrane	65.02	64.31
CDY24699	Canola	plasma membrane	64.65	63.26
CDY05257	Canola	plasma membrane	64.65	63.04
Bra020755.1-P	Field mustard	plasma membrane	62.27	62.96
PGSC0003DMT400056556	Potato	golgi, plasma membrane	34.98	62.42
Zm00001d028330_P048	Maize	plasma membrane	61.17	61.85
KRH50930	Soybean	mitochondrion	68.31	59.21
Zm00001d045883_P001	Maize	plasma membrane	54.03	54.13
Zm00001d041859_P001	Maize	mitochondrion	13.92	50.0
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	53.3	41.34
Zm00001d048459_P007	Maize	plasma membrane	34.25	39.04
Zm00001d025052_P007	Maize	plasma membrane	31.32	32.88
Zm00001d021844_P003	Maize	mitochondrion	55.86	32.48
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	39.01	27.03
Zm00001d019978_P001	Maize	plasma membrane	26.19	26.68
Zm00001d020892_P003	Maize	plasma membrane	16.48	18.15

Protein Annotations

Gene3D:1.20.1530.20	EntrezGene:100274279	MapMan:24.2.8.1.1	ProteinID:AQK48712.1	EMBL:BT084759	UniProt:C4J1R2
InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0008150	GO:GO:0015297
GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055085
GO:GO:1902600	InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084
PANTHER:PTHR10110	PANTHER:PTHR10110:SF154	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI0001A4C305	EnsemblPlantsGene:Zm00001d048732
EnsemblPlants:Zm00001d048732_P005	EnsemblPlants:Zm00001d048732_T005	SEG:seg	:	:	:

Description

Sodium/hydrogen exchanger

Coordinates

chr4:+:4470001..4475393

Molecular Weight (calculated)

59499.9 Da

IEP (calculated)

9.178

GRAVY (calculated)

0.526

Length

546 amino acids

Sequence
(BLAST)

001: MGLGAAMALA LGDPPADYAS IAAVGLFVAL MCVCIVVGHL LEENRWMNES ITALFIGLGT GAVILFASSG KHSRVLVFSE DLFFIYLLPP IIFNAGFQVK
101: KKQFFRNFIT ITLFGAVGTL ISFTVISLGA LGLISRLNIG ALELGDYLAL GAIFSATDSV CTLQVLSQDE TPFLYSLVFG EGVVNDATSV VLFNAIQNFD
201: PGNISSAKLL NFIGSFLYLF GSSTILGVAS GLLSAYTIKK LYFGRHSTDR EVSIMMLMAY LSYMLAELLD LSGILTVFFC GIVMSHYTWH NVTESSRVTT
301: KHAFATLSFI SETFLFLYVG MDALDIEKWK IVGQTYSPVK SIALSSTILA LVLVSRAAFV FPLSFVSNLT KKTPNGKISF RQQVIVWWAG LMRGAVSIAL
401: AYNKFTRSGH TQQPSNAIMI TSTISVVLFS TIVFGLLTKP LIRLLIPSRH LSREPSALSE PSSPKSFFEQ LAANSPGHPD LENGISLRRP ASLRFLLVSP
501: ARSVHHYWRK FDDSFMRPVF GGRGFVPFVP GSPTESSLPL LPGNEN

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.