Factsheet for Zm00001d019978_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35307	Sorghum	plastid	98.32	98.32
TraesCS5A01G176100.3	Wheat	plasma membrane	93.28	93.46
TraesCS5B01G173800.1	Wheat	plasma membrane	93.1	93.45
TraesCS5D01G180800.1	Wheat	plasma membrane	92.91	93.26
Os09t0286400-01	Rice	plasma membrane	91.04	91.22
HORVU5Hr1G053720.2	Barley	plastid	93.1	83.17
KRH11690	Soybean	plasma membrane	77.8	78.09
KRH51250	Soybean	plasma membrane	76.68	77.99
Solyc04g056600.2.1	Tomato	plasma membrane	76.68	77.4
KRH36691	Soybean	plasma membrane	77.05	77.34
AT1G79610.1	Thale cress	plasma membrane	77.05	77.2
AT1G54370.1	Thale cress	plasma membrane	72.95	75.05
GSMUA_Achr2P05520_001	Banana	plasma membrane	34.51	74.9
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	69.78	73.19
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	42.72	72.7
CDX79331	Canola	plasma membrane	75.37	72.53
CDX67985	Canola	plasma membrane	75.19	72.35
VIT_15s0024g00260.t01	Wine grape	plasma membrane	32.65	72.31
CDX88553	Canola	plasma membrane	74.44	68.44
CDX87370	Canola	plasma membrane	75.19	62.58
Zm00001d020892_P003	Maize	plasma membrane	46.27	50.0
Zm00001d022504_P001	Maize	plasma membrane	26.68	26.53
Zm00001d045883_P001	Maize	plasma membrane	26.68	26.24
Zm00001d048732_P005	Maize	plasma membrane	26.68	26.19
Zm00001d024832_P002	Maize	plasma membrane	26.68	25.58
Zm00001d041859_P001	Maize	mitochondrion	6.34	22.37
Zm00001d028330_P048	Maize	plasma membrane	19.59	19.44
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	19.59	14.91
Zm00001d048459_P007	Maize	plasma membrane	12.5	13.99
Zm00001d021844_P003	Maize	mitochondrion	20.15	11.5
Zm00001d025052_P007	Maize	plasma membrane	10.63	10.96
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	13.06	8.88

Protein Annotations

MapMan:24.2.8.1.1	UniProt:B6U8F1	EMBL:BT069314	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	EMBL:EU973516
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385
GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	InterPro:NaH_exchanger
ProteinID:ONM54014.1	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF127	TIGRFAMs:TIGR00840
TMHMM:TMhelix	UniParc:UPI000182ECC2	EnsemblPlantsGene:Zm00001d019978	EnsemblPlants:Zm00001d019978_P001	EnsemblPlants:Zm00001d019978_T001	SEG:seg

Description

Sodium/hydrogen exchanger

Coordinates

chr7:-:81486383..81509317

Molecular Weight (calculated)

58894.3 Da

IEP (calculated)

5.214

GRAVY (calculated)

0.396

Length

536 amino acids

Sequence
(BLAST)

001: MALELSLASA SPPAGGGLAQ PPPLAPPGKE QQVAGVGILL QISMLVLSFV LGHVLRRHRF YYLPEASASL LIGLVVGGLA NISNTETNTR TWFNFHEEFF
101: FLFLLPPIIF QSGFSLSPKP FFANFGAIVT FAILGTFIAS VVTGVLVYLG GLTFLMYKLP LVECLMFGAL ISATDPVTVL SIFQELGSDV NLYALVFGES
201: VLNDAMAISL YRTMSSVRSH AAGGENFFMM ILQFLETFVG SMSSGVGVGF ISALLFKYAG LDVDNLQNLE CCLFVLFPYF SYMLAEGLGL SGIVSILFTG
301: MVMKHYTYSN LSDNSQRFVS AFFHLLSSLA ETFVFIYMGF DIAMEEHSWS HVGFIFFSII FIVVARAANV FSCAYLVNMS RPEHRRIPVK HQKALWFSGL
401: RGAMAFALAL QSVHELPEGH GKTIFTTTTA IVVLTVLLIG GSTGTMLESL DVVGDENTSR ENYEDNNGYM PPSYEEGTSS GGGLRMKLKQ FHKSTTSFTA
501: LDKNYLTPFF TSQTDDDNDD DFSQQPQNRR LAFYDQ

Best Arabidopsis Sequence Match ( AT1G79610.1 )
(BLAST)

001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG

Arabidopsis Description

NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.