Factsheet for Zm00001d003728_P056

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021844_P003	Maize	mitochondrion	76.02	63.79
Zm00001d048459_P007	Maize	plasma membrane	36.17	59.5
Zm00001d025052_P007	Maize	plasma membrane	38.58	58.46
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	47.21	52.84
Zm00001d028330_P048	Maize	plasma membrane	28.81	42.04
Zm00001d048732_P005	Maize	plasma membrane	27.03	39.01
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	26.14	38.08
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.11	35.19
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.11	35.12
Os11t0648000-01	Rice	plasma membrane	23.98	34.68
Zm00001d041859_P001	Maize	mitochondrion	6.47	33.55
GSMUA_Achr8P06790_001	Banana	plasma membrane	22.21	32.53
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	21.07	32.42
PGSC0003DMT400056555	Potato	plasma membrane	10.28	32.14
Zm00001d022504_P001	Maize	plasma membrane	21.7	31.73
GSMUA_Achr3P23840_001	Banana	plasma membrane	21.57	31.66
PGSC0003DMT400027658	Potato	plasma membrane	21.32	31.28
Zm00001d024832_P002	Maize	plasma membrane	22.08	31.13
Solyc01g067710.2.1	Tomato	plasma membrane	21.19	31.1
KRH02192	Soybean	plasma membrane	20.56	30.22
VIT_05s0020g01960.t01	Wine grape	plasma membrane	20.69	30.13
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	24.11	29.46
GSMUA_Achr6P20250_001	Banana	plasma membrane	21.32	29.32
Solyc06g008820.2.1	Tomato	plasma membrane	19.8	29.21
AT3G06370.3	Thale cress	plasma membrane	20.3	28.99
GSMUA_Achr2P01560_001	Banana	plasma membrane	19.67	28.81
VIT_07s0104g01280.t01	Wine grape	plasma membrane	17.77	28.06
CDY24699	Canola	plasma membrane	19.8	27.96
CDY05257	Canola	plasma membrane	19.67	27.68
Bra020755.1-P	Field mustard	plasma membrane	18.15	26.48
PGSC0003DMT400056556	Potato	golgi, plasma membrane	10.15	26.14
KRH50930	Soybean	mitochondrion	20.43	25.56
Zm00001d045883_P001	Maize	plasma membrane	17.51	25.32
Zm00001d019978_P001	Maize	plasma membrane	8.88	13.06
Zm00001d020892_P003	Maize	plasma membrane	5.08	8.06

Protein Annotations

Gene3D:3.20.20.140	MapMan:35.1	UniProt:A0A1D6EBB1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	InterPro:DNase_TatD-rel_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004518	GO:GO:0005215	GO:GO:0005575	GO:GO:0006139
GO:GO:0006259	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015297	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016788
GO:GO:0016888	GO:GO:0055085	GO:GO:1902600	InterPro:Metal_Hydrolase	ProteinID:ONM17609.1	PFAM:PF00999
PFAM:PF01026	ScanProsite:PS01091	PANTHER:PTHR10110	PANTHER:PTHR10110:SF154	SUPFAM:SSF51556	TMHMM:TMhelix
InterPro:TatD_family	UniParc:UPI000842C826	EnsemblPlantsGene:Zm00001d003728	EnsemblPlants:Zm00001d003728_P056	EnsemblPlants:Zm00001d003728_T056	SEG:seg

Description

Sodium/hydrogen exchanger 2

Coordinates

chr2:-:56632519..56643296

Molecular Weight (calculated)

88679.2 Da

IEP (calculated)

9.062

GRAVY (calculated)

0.053

Length

788 amino acids

Sequence
(BLAST)

001: MKIQPILQED LKLDFSKSRT NKTGNAEITK RRRMVVIDEV DSFLFRPHVG LRAKFQVKKK QFFRNFITIT LFGAVGTLIS FTVISLGALG LISRLNIGAL
101: ELGDYLGVVN DTTSVVLFNA IHNFDPGNIS GAKLLNFISS FLYLFGSNTI LGVASGLLSA YTIKKLYFGR HSTDREVSIM MLMAYLSYML AEPGKVYRFE
201: QHHFSLGAGF KSCFCFPTIL SIKFDQKTPN GKISFRQQVI VWWAGLMRGV VSIALAYNKV NLVFGLYGLS FGLELCYCFC FLYPFQNIGH FLLSARHFGR
301: DIIMPNLKSS VTTIASAVEY MDEVLKALPP GEARNEDSRT LQFNYGSFKH KALDKSLTKK VPKNRLTSNT KLTQCCSIVG IFEALTAFPF LPSCCAKPCP
401: KPSTILFQSP LSTIFQGKTL AILHEFQVLQ VVAVGECGLD YDRLQFCPTD MQKKFPGGVT YSFTDLAEDQ DRLLSFEKMF IGVNGSSLKT NGNLEVLRGI
501: PVERLMMETD SPYCDIINTH AGSQYVKSVW PSKKKEKYEP DSTVKGRNEP CLVREKTLAI LHEFQVLHVV AVGECGLDYD RLQFCPADMQ KKYFEKQFEL
601: AKAVKLPMFL HMRAVGEDLC EIMTRNLHRF PGGVTHSFTD SRIGYFLLRR CLSVKSLSPS NKNLHLLQHD DQCSTTLIRV EIQISSVENI CFSFKYFILL
701: HAFSVEASKQ VLEVVAGSKE ISDIEGLSRT LYHNTCSSSS AVFDKSSFNQ CEYMINGYTN LAGSSFLRIL TRLLMRSLRV VLPSRIAD

Best Arabidopsis Sequence Match ( AT3G06370.1 )
(BLAST)

001: MVIGLSTMLE KTEALFASDH ASVVSMNLFV ALLCACIVLG HLLEETRWMN ESITALIIGS CTGIVILLIS GGKSSRILVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKQFFRNF MTIMLFGAIG TLISFVIISF GAKHLFEKMN IGDLTIADYL AIGAIFSATD SVCTLQVLNQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQR
201: FDLTNINSAI ALEFAGNFFY LFILSTALGV AAGLLSAFVI KKLYIGRHST DREVALMMLL AYLSYMLAEL FHLSSILTVF FCGIVMSHYT WHNVTDKSKV
301: TTKHTFAAMS FLAEIFIFLY VGMDALDIEK WDVVRNSPGQ SIGVSSILLG LILLGRAAFV FPLSFLSNLT KSSPDEKIDL KKQVTIWWAG LMRGAVSMAL
401: AYNQFTTSGH TKVLGNAIMI TSTITVVLFS TVVFGLLTKP LVKHLQPSSK QSSTTALQIT LRSSFHDPIL HEPLLSTQGQ SEYDPEQHVS FRMFWKSPSR
501: FTH

Arabidopsis Description

NHX4NHX4 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS48]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.