CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24699	Canola	plasma membrane	98.75	99.1
AT3G06370.3	Thale cress	plasma membrane	87.5	88.77
KRH02192	Soybean	plasma membrane	70.18	73.32
VIT_05s0020g01960.t01	Wine grape	plasma membrane	70.71	73.2
GSMUA_Achr11P...	Banana	plasma membrane	69.29	72.25
GSMUA_Achr8P21980_001	Banana	plasma membrane	69.29	71.59
GSMUA_Achr3P23840_001	Banana	plasma membrane	68.21	71.14
PGSC0003DMT400027658	Potato	plasma membrane	68.21	71.14
Solyc01g067710.2.1	Tomato	plasma membrane	68.21	71.14
KXG36886	Sorghum	plasma membrane	67.86	70.9
GSMUA_Achr8P06790_001	Banana	plasma membrane	68.04	70.82
Zm00001d022504_P001	Maize	plasma membrane	67.86	70.5
CDY27804	Canola	plasma membrane	68.21	69.96
CDY41925	Canola	plasma membrane	68.57	69.95
Os07t0666900-01	Rice	vacuole	66.61	69.72
CDY19707	Canola	plasma membrane	66.07	69.68
CDY00002	Canola	plasma membrane	66.25	69.35
CDY25045	Canola	plasma membrane	67.32	69.3
CDY50586	Canola	plasma membrane	67.14	69.12
TraesCS2A01G121000.1	Wheat	plasma membrane	66.25	68.96
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	65.36	68.03
GSMUA_Achr10P...	Banana	plasma membrane	65.54	67.59
HORVU2Hr1G021020.4	Barley	plasma membrane	67.32	66.61
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.39	65.74
GSMUA_Achr2P01560_001	Banana	plasma membrane	63.04	65.61
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.21	65.43
Os11t0648000-01	Rice	plasma membrane	63.57	65.32
Zm00001d048732_P005	Maize	plasma membrane	63.04	64.65
GSMUA_Achr6P20250_001	Banana	plasma membrane	66.07	64.57
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	62.14	64.33
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	58.75	64.26
KXG21297	Sorghum	plasma membrane	62.14	63.74
Os05t0148600-01	Rice	plasma membrane	61.79	63.6
TraesCS1D01G093900.1	Wheat	plasma membrane	61.25	62.82
TraesCS1A01G102300.1	Wheat	plasma membrane	61.07	62.64
TraesCS1B01G112700.1	Wheat	plasma membrane	61.07	62.64
Zm00001d024832_P002	Maize	plasma membrane	62.32	62.43
KRH50930	Soybean	mitochondrion	70.18	62.38
HORVU1Hr1G020360.2	Barley	plasma membrane	60.54	62.09
TraesCS2B01G141900.1	Wheat	plasma membrane	61.25	57.36
CDY17324	Canola	plasma membrane	52.5	55.16
CDX80670	Canola	plasma membrane	38.75	55.08
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	62.68	54.42
CDY29237	Canola	endoplasmic reticulum, plasma membrane, plastid	9.11	54.26
CDY45655	Canola	plasma membrane	51.25	54.25
CDX86176	Canola	golgi, plasma membrane, plastid	13.93	51.32
Zm00001d028330_P048	Maize	plasma membrane	44.46	46.11
Zm00001d048459_P007	Maize	plasma membrane	26.79	31.32
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	37.5	29.83
Zm00001d025052_P007	Maize	plasma membrane	23.21	25.0
Zm00001d021844_P003	Maize	mitochondrion	40.71	24.28
CDX67985	Canola	plasma membrane	23.04	23.16
CDX79331	Canola	plasma membrane	23.04	23.16
CDX88553	Canola	plasma membrane	22.14	21.27
CDX87370	Canola	plasma membrane	23.04	20.03
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	27.68	19.67

Protein Annotations

MapMan:24.2.8.1.1	GO:A0A078EWC0	EnsemblPlants:CDY05257	ProteinID:CDY05257	ProteinID:CDY05257.1	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0055075	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00120080001	InterPro:Na/H_exchanger_plant	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF117	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI0004EEE69E	SEG:seg	:

Description

BnaC05g45460D

Coordinates

chrLK031960:-:656533..659863

Molecular Weight (calculated)

62249.4 Da

IEP (calculated)

7.101

GRAVY (calculated)

0.430

Length

560 amino acids

Sequence
(BLAST)

001: MAFGLLNTML EKSETLLGSD HASVVSMNLF VALLCACIVL GHLLEETRWM NESITALIIG SCTGIVILLI SGGKSSRILV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FMTIMLFGAI GTLISFAIIS LGAMHFFEKM NIGDLTISDY LAIGAIFSAT DSVCTLQVLN KDETPLLYSL VFGEGVVNDA TSVVLFNAIQ
201: RFDLTHINST IVLEFAGNFF SLFILSTALG VAAGLLSAFT IKKLYFGKIK HSTDREVALM MLIAYLSYML AELFHLSSIL TVFFCGITMS HYTWHNVTDK
301: SKVTTKHTFA ALSFLAEIFI FLYVGMDALD IEKWDVVRNS PGQSIGVSAI LLGLILLGRA AFVFPLSFLS NLTKFSPDEK IDWKKQVTIW WAGLMRGAVS
401: MALAYNQFTT SGHTKLLGNA IMITSTITVV LFSTVVFGLL TKPLVKHLQP PSKKPSTPMS SFHEPLLNGD GDSSYIENHE PLHRTQGQSD YILEQITLRM
501: FLSTPSRAIH HYWRRFDNAV MRRIFGGRGV SEVVPGSPID TSVRQLWTED VENKEQYAEP

Best Arabidopsis Sequence Match ( AT3G06370.4 )
(BLAST)

001: MVIGLSTMLE KTEALFASDH ASVVSMNLFV ALLCACIVLG HLLEETRWMN ESITALIIGS CTGIVILLIS GGKSSRILVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKQFFRNF MTIMLFGAIG TLISFVIISF GAKHLFEKMN IGDLTIADYL AIGAIFSATD SVCTLQVLNQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQR
201: FDLTNINSAI ALEFAGNFFY LFILSTALGV AAGLLSAFVI KKLYIGRHST DREVALMMLL AYLSYMLAEL FHLSSILTVF FCGIVMSHYT WHNVTDKSKV
301: TTKHTFAAMS FLAEIFIFLY VGMDALDIEK WDVVRNSPGQ SIGVSSILLG LILLGRAAFV FPLSFLSNLT KSSPDEKIDL KKQVTIWWAG LMRGAVSMAL
401: AYNQFTTSGH TKVLGNAIMI TSTITVVLFS TVVFGLLTKP LVKHLQPSSK QSSTTALQIT LRSSFHDPIL HEPLLSTQGQ SEYDPEQHVS FRMFWKSPSR
501: AIHHYWRKFD NAVMRRIFGG RGVSPVVPGS PIENSVPQWS EEVENKEQNG EP

Arabidopsis Description

NHX4NHX4 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS48]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.