Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020599.1-P | Field mustard | plasma membrane | 94.3 | 100.0 |
| CDY50586 | Canola | plasma membrane | 99.45 | 99.45 |
| CDY19707 | Canola | plasma membrane | 94.67 | 96.99 |
| CDY00002 | Canola | plasma membrane | 94.49 | 96.07 |
| AT5G27150.1 | Thale cress | plasma membrane | 92.65 | 93.68 |
| CDY27804 | Canola | plasma membrane | 86.58 | 86.26 |
| CDY41925 | Canola | plasma membrane | 86.58 | 85.79 |
| CDY29237 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.15 | 81.91 |
| VIT_14s0030g00710.t01 | Wine grape | plasma membrane | 77.21 | 77.92 |
| KRH34011 | Soybean | plasma membrane | 77.02 | 76.74 |
| KRG92790 | Soybean | plasma membrane | 76.84 | 76.56 |
| Solyc01g098190.2.1 | Tomato | plasma membrane | 74.45 | 75.56 |
| PGSC0003DMT400057913 | Potato | plasma membrane | 74.26 | 75.37 |
| CDX80670 | Canola | plasma membrane | 53.86 | 74.37 |
| KRH68649 | Soybean | plasma membrane | 74.63 | 74.22 |
| KRG96912 | Soybean | plasma membrane | 73.71 | 73.31 |
| CDX86176 | Canola | golgi, plasma membrane, plastid | 19.49 | 69.74 |
| CDY24699 | Canola | plasma membrane | 69.3 | 67.56 |
| CDY05257 | Canola | plasma membrane | 69.3 | 67.32 |
| CDY17324 | Canola | plasma membrane | 56.07 | 57.22 |
| CDY45655 | Canola | plasma membrane | 54.04 | 55.58 |
| Zm00001d041859_P001 | Maize | mitochondrion | 12.32 | 44.08 |
| CDX67985 | Canola | plasma membrane | 25.37 | 24.78 |
| CDX79331 | Canola | plasma membrane | 25.37 | 24.78 |
| CDX88553 | Canola | plasma membrane | 24.63 | 22.98 |
| CDX87370 | Canola | plasma membrane | 25.37 | 21.43 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | GO:A0A078GF10 | UniProt:A0A078GF10 | EnsemblPlants:CDY25045 | ProteinID:CDY25045 |
| ProteinID:CDY25045.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0035725 | GO:GO:0055075 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00028880001 |
| InterPro:IPR038770 | InterPro:Na+/solute_symporter_sf | InterPro:Na/H_exchanger_plant | InterPro:NaH_exchanger | PFAM:PF00999 | PRINTS:PR01084 |
| PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 | TMHMM:TMhelix | UniParc:UPI0004EEF417 | SEG:seg | : |
Description
BnaC02g39630DBnaC02g39630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF10]
Coordinates
chrLK032167:-:594744..599157
Molecular Weight (calculated)
60343.1 Da
IEP (calculated)
7.622
GRAVY (calculated)
0.486
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMMASFLDS LVSKMPSLST SDHASVVSLN LFVALLCACI VLGHLLEENR WMNESITALM IGLATGVVIL LISNGKSSRL LVFSEDLFFI YLLPPIIFNA
101: GFQVKKKQFF RNFVTIMLFG AIGTVISCTV ITLGVTQFFK KLDIGTFDLG DYLAIGAIFA ATDSVCTLQV LNQDETPLLY SLVFGEGVVN DATSVVVFNA
201: IQSFDLTHLN HEAAFQLLGN FMYLFLLSTL LGVATGLISA YVIKKLYFGR HSTDREVALM MLMAYLSYML AELFDLSGIL TVFFCGIVMS HYTWHNVTES
301: SRITTKHTFA TLSFLAETFI FLYVGMDALD IDKWRSVSDS PGTSVAVSSI LIGLLMLGRA AFVFPLSFLS NLAKKNESEK INFKMQVVIW WSGLMRGAVS
401: MALAYNKFTS AGHTDLRGNA IMITSTITVC LFSTVVFGML TKPLIRFLLP HQKATTSFLS DGNTPKSIQI PLLDQDSFIE FTGNHNVPRP DSIRGFLTRP
501: TRTVHYYWRK FDDSFMRPVF GGRGFVPFVP GSPTERDPPD LSRA
101: GFQVKKKQFF RNFVTIMLFG AIGTVISCTV ITLGVTQFFK KLDIGTFDLG DYLAIGAIFA ATDSVCTLQV LNQDETPLLY SLVFGEGVVN DATSVVVFNA
201: IQSFDLTHLN HEAAFQLLGN FMYLFLLSTL LGVATGLISA YVIKKLYFGR HSTDREVALM MLMAYLSYML AELFDLSGIL TVFFCGIVMS HYTWHNVTES
301: SRITTKHTFA TLSFLAETFI FLYVGMDALD IDKWRSVSDS PGTSVAVSSI LIGLLMLGRA AFVFPLSFLS NLAKKNESEK INFKMQVVIW WSGLMRGAVS
401: MALAYNKFTS AGHTDLRGNA IMITSTITVC LFSTVVFGML TKPLIRFLLP HQKATTSFLS DGNTPKSIQI PLLDQDSFIE FTGNHNVPRP DSIRGFLTRP
501: TRTVHYYWRK FDDSFMRPVF GGRGFVPFVP GSPTERDPPD LSRA
001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
Arabidopsis Description
NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.