Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00002 | Canola | plasma membrane | 99.25 | 98.5 |
| Bra036110.1-P | Field mustard | plasma membrane | 99.81 | 97.61 |
| CDY50586 | Canola | plasma membrane | 96.99 | 94.67 |
| CDY25045 | Canola | plasma membrane | 96.99 | 94.67 |
| AT5G27150.1 | Thale cress | plasma membrane | 93.03 | 91.82 |
| CDY27804 | Canola | plasma membrane | 87.57 | 85.16 |
| CDY41925 | Canola | plasma membrane | 87.57 | 84.7 |
| CDY29237 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.5 | 81.91 |
| VIT_14s0030g00710.t01 | Wine grape | plasma membrane | 78.34 | 77.18 |
| KRH34011 | Soybean | plasma membrane | 77.59 | 75.46 |
| KRG92790 | Soybean | plasma membrane | 77.4 | 75.27 |
| PGSC0003DMT400057913 | Potato | plasma membrane | 75.33 | 74.63 |
| Solyc01g098190.2.1 | Tomato | plasma membrane | 74.95 | 74.25 |
| KRH68649 | Soybean | plasma membrane | 75.89 | 73.67 |
| CDX80670 | Canola | plasma membrane | 54.61 | 73.6 |
| KRG96912 | Soybean | plasma membrane | 74.95 | 72.76 |
| CDX86176 | Canola | golgi, plasma membrane, plastid | 19.96 | 69.74 |
| CDY24699 | Canola | plasma membrane | 69.68 | 66.31 |
| CDY05257 | Canola | plasma membrane | 69.68 | 66.07 |
| CDY17324 | Canola | plasma membrane | 56.87 | 56.66 |
| CDY45655 | Canola | plasma membrane | 54.61 | 54.82 |
| Zm00001d041859_P001 | Maize | mitochondrion | 12.81 | 44.74 |
| CDX67985 | Canola | plasma membrane | 26.37 | 25.13 |
| CDX79331 | Canola | plasma membrane | 26.37 | 25.13 |
| CDX88553 | Canola | plasma membrane | 25.61 | 23.33 |
| CDX87370 | Canola | plasma membrane | 26.37 | 21.74 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | GO:A0A078G3X6 | UniProt:A0A078G3X6 | EnsemblPlants:CDY19707 | ProteinID:CDY19707 |
| ProteinID:CDY19707.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0035725 | GO:GO:0055075 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00009439001 |
| InterPro:IPR038770 | InterPro:Na+/solute_symporter_sf | InterPro:Na/H_exchanger_plant | InterPro:NaH_exchanger | PFAM:PF00999 | PRINTS:PR01084 |
| PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 | TMHMM:TMhelix | UniParc:UPI0004EEEF4F | SEG:seg | : |
Description
BnaA09g03600DBnaA09g03600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3X6]
Coordinates
chrLK032100:+:17521..21932
Molecular Weight (calculated)
58878.2 Da
IEP (calculated)
7.897
GRAVY (calculated)
0.489
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLSASDHA SVVSLNLFVA LLCACIVLGH LLEENRWMNE SITALLIGLA TGVVILLISN GKSSHLLVFS EDLFFIYLLP PIIFNAGFQV KKKQFFRNFV
101: TIMLFGAIGT VVSCTVITLG VTQFFKKLDI GTFDLGDYLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVVFNAIQSF DLTHLNHEAA
201: FRLLGNFFYL FLLSTLLGVA TGLISAYIIK KLYFGRHSTD REVALMMLMA YLSYMLAELF DLSGILTVFF CGIVMSHYTW HNVTESSRIT TKHAFATLSF
301: LAETFIFLYV GMDALDIDKW RSVSDSPGTS VAVSSILIGL LMLGRAAFVF PLSFLSNLAK KNQSEKIDFK MQVVIWWSGL MRGAVSMALA YNKFTRAGKT
401: DLRGNAIMIT STITVCLFST VVFGMLTKPL IRFLLPHQKA TTSFLSDGNT PKSIQIPLID QDSFIEFAGN HNVPRPDSIR GFLTRPTRTV HYYWRQFDDS
501: FMRPVFGGRG FVPFVPGSPT ERDPPTDLSR A
101: TIMLFGAIGT VVSCTVITLG VTQFFKKLDI GTFDLGDYLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVVFNAIQSF DLTHLNHEAA
201: FRLLGNFFYL FLLSTLLGVA TGLISAYIIK KLYFGRHSTD REVALMMLMA YLSYMLAELF DLSGILTVFF CGIVMSHYTW HNVTESSRIT TKHAFATLSF
301: LAETFIFLYV GMDALDIDKW RSVSDSPGTS VAVSSILIGL LMLGRAAFVF PLSFLSNLAK KNQSEKIDFK MQVVIWWSGL MRGAVSMALA YNKFTRAGKT
401: DLRGNAIMIT STITVCLFST VVFGMLTKPL IRFLLPHQKA TTSFLSDGNT PKSIQIPLID QDSFIEFAGN HNVPRPDSIR GFLTRPTRTV HYYWRQFDDS
501: FMRPVFGGRG FVPFVPGSPT ERDPPTDLSR A
001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
Arabidopsis Description
NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.