Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19707 | Canola | plasma membrane | 98.5 | 99.25 |
| Bra036110.1-P | Field mustard | plasma membrane | 98.69 | 97.24 |
| CDY50586 | Canola | plasma membrane | 96.07 | 94.49 |
| CDY25045 | Canola | plasma membrane | 96.07 | 94.49 |
| AT5G27150.1 | Thale cress | plasma membrane | 92.71 | 92.19 |
| CDY27804 | Canola | plasma membrane | 87.1 | 85.35 |
| CDY41925 | Canola | plasma membrane | 86.92 | 84.7 |
| CDY29237 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.21 | 80.85 |
| VIT_14s0030g00710.t01 | Wine grape | plasma membrane | 77.94 | 77.37 |
| KRH34011 | Soybean | plasma membrane | 77.2 | 75.64 |
| KRG92790 | Soybean | plasma membrane | 77.01 | 75.46 |
| PGSC0003DMT400057913 | Potato | plasma membrane | 74.95 | 74.81 |
| Solyc01g098190.2.1 | Tomato | plasma membrane | 74.58 | 74.44 |
| CDX80670 | Canola | plasma membrane | 54.21 | 73.6 |
| KRH68649 | Soybean | plasma membrane | 75.14 | 73.49 |
| KRG96912 | Soybean | plasma membrane | 74.39 | 72.76 |
| CDX86176 | Canola | golgi, plasma membrane, plastid | 19.44 | 68.42 |
| CDY24699 | Canola | plasma membrane | 69.35 | 66.49 |
| CDY05257 | Canola | plasma membrane | 69.35 | 66.25 |
| CDY17324 | Canola | plasma membrane | 56.82 | 57.04 |
| CDY45655 | Canola | plasma membrane | 54.58 | 55.2 |
| Zm00001d041859_P001 | Maize | mitochondrion | 12.52 | 44.08 |
| CDX67985 | Canola | plasma membrane | 26.17 | 25.13 |
| CDX79331 | Canola | plasma membrane | 26.17 | 25.13 |
| CDX88553 | Canola | plasma membrane | 25.42 | 23.33 |
| CDX87370 | Canola | plasma membrane | 26.17 | 21.74 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | GO:A0A078EG01 | EnsemblPlants:CDY00002 | ProteinID:CDY00002 | ProteinID:CDY00002.1 |
| InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055075 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00109475001 | InterPro:IPR038770 | InterPro:Na+/solute_symporter_sf | InterPro:Na/H_exchanger_plant | InterPro:NaH_exchanger |
| PFAM:PF00999 | PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 | TMHMM:TMhelix | UniParc:UPI0004EEF7F8 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g02990D
Coordinates
chrLK031916:-:187417..191626
Molecular Weight (calculated)
59320.7 Da
IEP (calculated)
7.622
GRAVY (calculated)
0.491
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPLLDSLSA SDHASVVSLN LFVALLCACI VLGHLLEENR WMNESITALL IGLATGVVIL LISNGKSSHL LVFSEDLFFI YLLPPIIFNA GFQVKKKQFF
101: RNFVTIMLFG AIGTVVSCTV ITLGVTQFFK KLDIGTFDLG DYLAIGAIFA ATDSVCTLQV LNQDETPLLY SLVFGEGVVN DATSVVVFNA IQSFDLTHLN
201: HEAAFRLLGN FFYLFLLSTL LGVATGLISA YVIKKLYFGR HSTDREVALM MLMAYLSYML AELFDLSGIL TVFFCGIVMS HYTWHNVTES SRITTKHAFA
301: TLSFLAETFI FLYVGMDALD IDKWRSVSDS PGTSVAVSSI LIGLLMLGRA AFVFPLSFLS NLAKKNQSEK IDFKMQVVIW WSGLMRGAVS MALAYNKFTR
401: AGKTDLRGNA IMITSTITVC LFSTVVFGML TKPLIRFLLP HQKATTSFLS DGNTPKSIQI PLIDQDSFIE FAGNHNVPRP DSIRGFLTRP TRTVHYYWRQ
501: FDDSFMRPVF GGRGFVPFVP GSPTEREPPT DLSRA
101: RNFVTIMLFG AIGTVVSCTV ITLGVTQFFK KLDIGTFDLG DYLAIGAIFA ATDSVCTLQV LNQDETPLLY SLVFGEGVVN DATSVVVFNA IQSFDLTHLN
201: HEAAFRLLGN FFYLFLLSTL LGVATGLISA YVIKKLYFGR HSTDREVALM MLMAYLSYML AELFDLSGIL TVFFCGIVMS HYTWHNVTES SRITTKHAFA
301: TLSFLAETFI FLYVGMDALD IDKWRSVSDS PGTSVAVSSI LIGLLMLGRA AFVFPLSFLS NLAKKNQSEK IDFKMQVVIW WSGLMRGAVS MALAYNKFTR
401: AGKTDLRGNA IMITSTITVC LFSTVVFGML TKPLIRFLLP HQKATTSFLS DGNTPKSIQI PLIDQDSFIE FAGNHNVPRP DSIRGFLTRP TRTVHYYWRQ
501: FDDSFMRPVF GGRGFVPFVP GSPTEREPPT DLSRA
001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
Arabidopsis Description
NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.