Factsheet for Solyc01g098190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
endoplasmic reticulum 3
vacuole 3
extracellular 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057913	Potato	plasma membrane	96.83	96.83
VIT_14s0030g00710.t01	Wine grape	plasma membrane	77.05	76.62
Solyc01g067710.2.1	Tomato	plasma membrane	76.31	76.16
KRH34011	Soybean	plasma membrane	77.05	75.64
KRG92790	Soybean	plasma membrane	77.05	75.64
AT5G27150.1	Thale cress	plasma membrane	75.75	75.46
Bra020599.1-P	Field mustard	plasma membrane	72.2	75.44
CDY19707	Canola	plasma membrane	74.25	74.95
Bra039469.1-P	Field mustard	plasma membrane	76.31	74.91
AT3G05030.4	Thale cress	plasma membrane	76.31	74.91
CDY27804	Canola	plasma membrane	76.12	74.73
CDY00002	Canola	plasma membrane	74.44	74.58
CDY50586	Canola	plasma membrane	75.56	74.45
CDY25045	Canola	plasma membrane	75.56	74.45
Bra036110.1-P	Field mustard	plasma membrane	75.19	74.22
CDY41925	Canola	plasma membrane	75.37	73.59
KRG96912	Soybean	plasma membrane	73.51	72.03
KRH68649	Soybean	plasma membrane	73.13	71.66
Solyc06g008820.2.1	Tomato	plasma membrane	66.98	67.23
CDX80670	Canola	plasma membrane	45.15	61.42
Solyc10g006080.1.1	Tomato	plasma membrane	56.9	58.1
Zm00001d041859_P001	Maize	mitochondrion	12.87	45.39
Solyc04g056600.2.1	Tomato	plasma membrane	27.43	27.68

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0015297
GO:GO:0015299	GO:GO:0015385	GO:GO:0015386	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0035725	GO:GO:0051453	GO:GO:0055075	GO:GO:0055085	GO:GO:0071805	GO:GO:0090333
GO:GO:0098719	GO:GO:1902600	InterPro:IPR038770	UniProt:K4B0K6	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	EnsemblPlantsGene:Solyc01g098190.2
EnsemblPlants:Solyc01g098190.2.1	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI00027685CB	SEG:seg	:

Description

Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:K4B0K6]

Coordinates

chr1:+:88781594..88787300

Molecular Weight (calculated)

58772.5 Da

IEP (calculated)

7.692

GRAVY (calculated)

0.534

Length

536 amino acids

Sequence
(BLAST)

001: MASVLASLFP KLGSLGTSDH ASVASINLFV ALLCACIIIG HLLEENRWVN ESITALIIGL GTGVVILLVS GGKSSHLLVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKQFFVNF MTIMLFGAIG TLVSCAIISL GAIQTFKKLD IEFLDIGDYL AIGAIFAATD SVCTLQVLHQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQN
201: VDLTSLNPSI ALSFLGNFFY LFLASTLLGA GTGLLSAYII KKLYFGRHST DREVALMMLM AYLSYMLAEL FYLSGILTVF FCGIVMSHYT WHNVTESSRV
301: TTRHTFATLS FLAETFLFLY VGMDALDIEK WKFVGDRPGL SISASSILMG LILLGRAAFV FPLSYLSNLM KKSSEEKITF RQQVIIWWAG LMRGAVSMAL
401: AYNKFTHGGH TQLQDNAIMI TSTITIVLFS TMVFGLMTKP LISLLLPPQR QLSTVSSGAN TPKSLTAPLL GSREDSEGDL NVPDLPHPPS LRMLLTAPSH
501: KVHRYWRKFD DAFMRPMFGG RGFAPPAPRS PTEHGP

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.