Factsheet for Bra020599.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25045	Canola	plasma membrane	100.0	94.3
CDY50586	Canola	plasma membrane	99.61	93.93
Bra036110.1-P	Field mustard	plasma membrane	96.88	91.53
AT5G27150.1	Thale cress	plasma membrane	93.76	89.41
Bra039469.1-P	Field mustard	plasma membrane	87.72	82.42
VIT_14s0030g00710.t01	Wine grape	plasma membrane	78.75	74.95
KRH34011	Soybean	plasma membrane	77.97	73.26
KRG92790	Soybean	plasma membrane	77.78	73.08
Solyc01g098190.2.1	Tomato	plasma membrane	75.44	72.2
PGSC0003DMT400057913	Potato	plasma membrane	75.24	72.01
KRH68649	Soybean	plasma membrane	75.83	71.12
KRG96912	Soybean	plasma membrane	75.05	70.38
Bra009975.1-P	Field mustard	golgi, plasma membrane, plastid	20.66	69.74
Bra020755.1-P	Field mustard	plasma membrane	68.62	65.19
Bra009647.1-P	Field mustard	cytosol	7.8	56.34
Bra002905.1-P	Field mustard	plasma membrane	57.12	54.97
Zm00001d041859_P001	Maize	mitochondrion	13.06	44.08
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	24.56	24.66

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EnsemblPlantsGene:Bra020599	EnsemblPlants:Bra020599.1	EnsemblPlants:Bra020599.1-P	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725
GO:GO:0055075	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770	UniProt:M4DVQ5	InterPro:Na+/solute_symporter_sf
InterPro:Na/H_exchanger_plant	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117
TMHMM:TMhelix	UniParc:UPI00025468DE	SEG:seg	:	:	:

Description

AT5G27150 (E=2e-220) NHX1, ATNHX, AT-NHX1, ATNHX1 | NHX1 (NA+/H+ EXCHANGER); protein binding / sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA02:+:24294026..24297168

Molecular Weight (calculated)

56807.5 Da

IEP (calculated)

7.092

GRAVY (calculated)

0.469

Length

513 amino acids

Sequence
(BLAST)

001: MPSLSTSDHA SVVSLNLFVA LLCACIVLGH LLEENRWMNE SITALMIGLA TGVVILLISN GKSSRLLVFS EDLFFIYLLP PIIFNAGFQV KKKQFFRNFV
101: TIMLFGAIGT VISCTVITLG VTQFFKKLDI GTFDLGDYLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVVFNAIQSF DLTHLNHEAA
201: FQLLGNFMYL FLLSTLLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF DLSGILTVFF CGIVMSHYTW HNVTESSRIT TKHTFATLSF
301: LAETFIFLYV GMDALDIDKW RSVSDSPGTS VAVSSILIGL LMLGRAAFVF PLSFLSNLAK KNESEKINFK MQVVIWWSGL MRGAVSMALA YNKFTSAGHT
401: DLRGNAIMIT STITVCLFST VKATTSFLSD GNTPKSIQIP LLDQDSFIEF TGNHNVPRPD SIRGFLTRPT RTVHYYWRKF DDSFMRPVFG GRGFVPFVPG
501: SPTERDPPDL SRA

Best Arabidopsis Sequence Match ( AT5G27150.1 )
(BLAST)

001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA

Arabidopsis Description

NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.