Factsheet for Bra039469.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 3
vacuole 3
extracellular 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27804	Canola	plasma membrane	99.82	99.82
AT3G05030.4	Thale cress	plasma membrane	92.12	92.12
Bra020599.1-P	Field mustard	plasma membrane	82.42	87.72
Bra036110.1-P	Field mustard	plasma membrane	86.08	86.56
VIT_14s0030g00710.t01	Wine grape	plasma membrane	76.19	77.18
PGSC0003DMT400057913	Potato	plasma membrane	75.46	76.87
Solyc01g098190.2.1	Tomato	plasma membrane	74.91	76.31
KRG92790	Soybean	plasma membrane	75.27	75.27
KRH34011	Soybean	plasma membrane	75.09	75.09
KRH68649	Soybean	plasma membrane	73.26	73.13
KRG96912	Soybean	plasma membrane	72.16	72.03
Bra020755.1-P	Field mustard	plasma membrane	67.95	68.7
Bra009975.1-P	Field mustard	golgi, plasma membrane, plastid	17.77	63.82
Bra002905.1-P	Field mustard	plasma membrane	56.59	57.97
Bra009647.1-P	Field mustard	cytosol	7.51	57.75
Zm00001d041859_P001	Maize	mitochondrion	12.82	46.05
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	23.26	24.85

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EnsemblPlantsGene:Bra039469	EnsemblPlants:Bra039469.1	EnsemblPlants:Bra039469.1-P	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811
GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0010107	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385
GO:GO:0015386	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075	GO:GO:0055085
GO:GO:0090333	GO:GO:1902600	InterPro:IPR038770	UniProt:M4FEE8	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	TIGRFAMs:TIGR00840
TMHMM:TMhelix	UniParc:UPI000254749E	SEG:seg	:	:	:

Description

AT3G05030 (E=5e-261) NHX2, ATNHX2 | NHX2 (SODIUM HYDROGEN EXCHANGER 2); sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA05:+:23478149..23481192

Molecular Weight (calculated)

60614.4 Da

IEP (calculated)

7.550

GRAVY (calculated)

0.471

Length

546 amino acids

Sequence
(BLAST)

001: MLASLYTSLT TKMLSVSTSD HASVVSLNLF VALLCACIVI GHLLEEHRWI NESITALLIG LGTGVVILLM SRGKSSHLLV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FVTIMAFGAI GTIISCTVIS LGAIHFFKKL DIATFDLGDI LAIGAIFAAT DSVCTLQVLN QDETPLLYSL VFGEGVVNDA TSVVLFNAIQ
201: SFDLTHLNHE AAFHFLGNFL YLFLLSTVLG VATGLVSAYV IKKLYFGRHS TDREVALMML MAYLSYMLAE LFALSGILTV FFCGIVMSHY TWHNVTESSR
301: VTTKHTFATL SFLAETFIFL YVGMDALDIE KWRFVSDSPG TSVAVSSILM GLVMLGRAAF VFPLSFLSNL SKKNQSEKID IKQQVVIWWA GLMRGAVSMA
401: LAYNKFTRSG HTELRGNAIM ITSTITVCLF STMVFGMLTK PLIRHLMPHQ STTTSMLSDD NTPKSLHMPL LDGEQQDSFV EFSGSHHDVP RPDSLRGFLM
501: RPARTVHHYW RQFDDAFMRP VFGGRGFVPF VPGSPIERST HDLSKP

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.