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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • vacuole 3
  • extracellular 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039469.1-P Field mustard plasma membrane 92.12 92.12
CDY41925 Canola plasma membrane 92.49 91.99
CDY27804 Canola plasma membrane 91.94 91.94
AT5G27150.1 Thale cress plasma membrane 87.73 89.03
VIT_14s0030g00710.t01 Wine grape plasma membrane 77.11 78.11
KRG92790 Soybean plasma membrane 76.92 76.92
KRH34011 Soybean plasma membrane 76.92 76.92
PGSC0003DMT400057913 Potato plasma membrane 75.46 76.87
Solyc01g098190.2.1 Tomato plasma membrane 74.91 76.31
KRH68649 Soybean plasma membrane 74.18 74.04
KRG96912 Soybean plasma membrane 73.08 72.94
AT3G06370.3 Thale cress plasma membrane 69.78 69.02
AT5G55470.1 Thale cress plasma membrane 55.49 57.28
Zm00001d041859_P001 Maize mitochondrion 12.64 45.39
AT1G54370.1 Thale cress plasma membrane 27.11 28.41
AT1G79610.1 Thale cress plasma membrane 26.19 26.73
Protein Annotations
Gene3D:1.20.1530.20MapMan:24.2.8.1.1EntrezGene:819665UniProt:A0A178VK10ProteinID:AAG51408.1ProteinID:AEE74177.1
ProteinID:AEE74178.2EMBL:AF490586EMBL:AK221629ProteinID:ANM64164.1ArrayExpress:AT3G05030EnsemblPlantsGene:AT3G05030
RefSeq:AT3G05030TAIR:AT3G05030RefSeq:AT3G05030-TAIR-GEnsemblPlants:AT3G05030.4InterPro:Cation/H_exchangerInterPro:Cation/H_exchanger_CPA1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0005774GO:GO:0005886GO:GO:0006810GO:GO:0006811GO:GO:0006812
GO:GO:0006814GO:GO:0006885GO:GO:0006950GO:GO:0008150GO:GO:0009628GO:GO:0009651
GO:GO:0009987GO:GO:0010107GO:GO:0015297GO:GO:0015299GO:GO:0015385GO:GO:0015386
GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0035725GO:GO:0051453GO:GO:0055075
GO:GO:0055085GO:GO:0090333GO:GO:0098719GO:GO:1902600InterPro:IPR038770Symbol:NHX2
RefSeq:NP_001319475.1RefSeq:NP_001326210.1RefSeq:NP_187154.1InterPro:Na+/solute_symporter_sfInterPro:Na/H_exchanger_plantInterPro:NaH_exchanger
ProteinID:OAP06770.1PFAM:PF00999PRINTS:PR01084PANTHER:PTHR10110PANTHER:PTHR10110:SF117UniProt:Q56XP4
TIGRFAMs:TIGR00840TMHMM:TMhelixUniParc:UPI00000A604BSEG:seg::
Description
NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
Coordinates
chr3:-:1393296..1397571
Molecular Weight (calculated)
60526.3 Da
IEP (calculated)
8.161
GRAVY (calculated)
0.465
Length
546 amino acids
Sequence
(BLAST)
001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.