Factsheet for AT5G27150.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020599.1-P	Field mustard	plasma membrane	89.41	93.76
CDY19707	Canola	plasma membrane	91.82	93.03
CDY00002	Canola	plasma membrane	92.19	92.71
CDY25045	Canola	plasma membrane	93.68	92.65
CDY50586	Canola	plasma membrane	93.12	92.1
Bra036110.1-P	Field mustard	plasma membrane	92.94	92.08
AT3G05030.4	Thale cress	plasma membrane	89.03	87.73
VIT_14s0030g00710.t01	Wine grape	plasma membrane	76.95	76.81
KRH34011	Soybean	plasma membrane	76.95	75.82
PGSC0003DMT400057913	Potato	plasma membrane	75.46	75.75
Solyc01g098190.2.1	Tomato	plasma membrane	75.46	75.75
KRG92790	Soybean	plasma membrane	76.77	75.64
KRH68649	Soybean	plasma membrane	74.91	73.67
KRG96912	Soybean	plasma membrane	74.35	73.13
CDX80670	Canola	plasma membrane	53.53	73.1
AT3G06370.3	Thale cress	plasma membrane	70.07	68.3
AT5G55470.1	Thale cress	plasma membrane	56.69	57.66
Zm00001d041859_P001	Maize	mitochondrion	12.64	44.74
AT1G54370.1	Thale cress	plasma membrane	26.77	27.64
AT1G79610.1	Thale cress	plasma membrane	26.77	26.92

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EntrezGene:832773	UniProt:A0A178UHQ8	ProteinID:AAB61069.1	ProteinID:AED93655.1
EMBL:AF056190	EMBL:AF106324	EMBL:AF510074	EMBL:AK226586	ArrayExpress:AT5G27150	EnsemblPlantsGene:AT5G27150
RefSeq:AT5G27150	TAIR:AT5G27150	RefSeq:AT5G27150-TAIR-G	EnsemblPlants:AT5G27150.1	TAIR:AT5G27150.1	EMBL:AY685183
Unigene:At.25435	ProteinID:CCH26522.1	ProteinID:CCH26523.1	ProteinID:CCH26524.1	ProteinID:CCH26525.1	ProteinID:CCH26526.1
ProteinID:CCH26527.1	ProteinID:CCH26528.1	ProteinID:CCH26529.1	ProteinID:CCH26530.1	ProteinID:CCH26531.1	ProteinID:CCH26532.1
ProteinID:CCH26533.1	ProteinID:CCH26534.1	ProteinID:CCH26535.1	ProteinID:CCH26536.1	ProteinID:CCH26537.1	ProteinID:CCH26538.1
ProteinID:CCH26539.1	ProteinID:CCH26540.1	ProteinID:CCH26541.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0000139
GO:GO:0000325	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005783	GO:GO:0005789	GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811
GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385
GO:GO:0015386	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0035725	GO:GO:0048366
GO:GO:0051453	GO:GO:0055075	GO:GO:0055085	GO:GO:0071805	GO:GO:0090333	GO:GO:0098719
GO:GO:1902600	InterPro:IPR038770	Symbol:NHX1	RefSeq:NP_198067.1	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	ProteinID:OAO93496.1	PFAM:PF00999	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	UniProt:Q0WVZ5	UniProt:Q68KI4
TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI000009E5CC	SEG:seg	:	:

Description

NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]

Coordinates

chr5:+:9553300..9557594

Molecular Weight (calculated)

59516.9 Da

IEP (calculated)

7.231

GRAVY (calculated)

0.458

Length

538 amino acids

Sequence
(BLAST)

001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.