Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G79610.1 | Thale cress | plasma membrane | 79.08 | 77.01 |
| Os09t0286400-01 | Rice | plasma membrane | 75.62 | 73.64 |
| KXG35307 | Sorghum | plastid | 75.24 | 73.13 |
| Zm00001d019978_P001 | Maize | plasma membrane | 75.05 | 72.95 |
| TraesCS5A01G176100.3 | Wheat | plasma membrane | 74.28 | 72.34 |
| TraesCS5B01G173800.1 | Wheat | plasma membrane | 74.09 | 72.28 |
| TraesCS5D01G180800.1 | Wheat | plasma membrane | 73.9 | 72.1 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 67.56 | 69.84 |
| GSMUA_Achr2P05520_001 | Banana | plasma membrane | 33.01 | 69.64 |
| TraesCS5B01G259100.2 | Wheat | plasma membrane | 66.99 | 66.86 |
| TraesCS5D01G268200.1 | Wheat | plasma membrane | 67.18 | 65.79 |
| TraesCS5A01G260700.1 | Wheat | plasma membrane | 67.18 | 65.79 |
| KXG35876 | Sorghum | plasma membrane | 67.56 | 65.19 |
| HORVU5Hr1G053720.2 | Barley | plastid | 74.09 | 64.33 |
| TraesCS7B01G149100.1 | Wheat | plasma membrane | 66.22 | 64.25 |
| HORVU7Hr1G049400.10 | Barley | endoplasmic reticulum, plasma membrane | 65.83 | 64.11 |
| TraesCS7A01G242300.1 | Wheat | plasma membrane | 66.22 | 63.65 |
| TraesCS7D01G241200.1 | Wheat | plasma membrane | 66.22 | 63.54 |
| HORVU5Hr1G072440.26 | Barley | golgi, mitochondrion, nucleus, plastid | 57.77 | 55.43 |
| Os09t0482620-00 | Rice | golgi, mitochondrion, peroxisome | 27.06 | 53.61 |
| Zm00001d020892_P003 | Maize | plasma membrane | 43.57 | 45.77 |
| AT3G05030.4 | Thale cress | plasma membrane | 28.41 | 27.11 |
| AT5G27150.1 | Thale cress | plasma membrane | 27.64 | 26.77 |
| AT5G55470.1 | Thale cress | plasma membrane | 26.49 | 26.09 |
| AT3G06370.3 | Thale cress | plasma membrane | 27.64 | 26.09 |
Protein Annotations
| MapMan:24.2.8.1.1 | EntrezGene:841878 | ProteinID:AAD25617.1 | ProteinID:AEE33089.1 | EMBL:AF490589 | EMBL:AK226435 |
| ArrayExpress:AT1G54370 | EnsemblPlantsGene:AT1G54370 | RefSeq:AT1G54370 | TAIR:AT1G54370 | RefSeq:AT1G54370-TAIR-G | EnsemblPlants:AT1G54370.1 |
| TAIR:AT1G54370.1 | Unigene:At.64855 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010008 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 |
| GO:GO:0015386 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0032580 | GO:GO:0051453 |
| GO:GO:0055085 | GO:GO:0071805 | GO:GO:0098719 | GO:GO:1902600 | Symbol:NHX5 | RefSeq:NP_175839.2 |
| InterPro:NaH_exchanger | PFAM:PF00999 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF127 |
| UniProt:Q8S396 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | UniParc:UPI00001970A3 | SEG:seg | : |
Description
NHX5Sodium/hydrogen exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8S396]
Coordinates
chr1:-:20293151..20297236
Molecular Weight (calculated)
57338.5 Da
IEP (calculated)
4.766
GRAVY (calculated)
0.444
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVMISPVE HDPQGQVKQQ QAAGVGILLQ IMMLVLSFVL GHVLRRHRFH YLPEASGSLL IGLIVGILAN ISDTETSIRT WFNFHEEFFF LFLLPPIIFQ
101: SGFSLQPKPF FSNFGAIVTF AIIGTFVASV VTGGLVYLGG SMYLMYKLPF VECLMFGALI SATDPVTVLS IFQDVGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVNRQS SSGEHFFMVV IRFFETFAGS MSAGVGVGFT SALLFKYAGL DTENLQNLEC CLFVLFPYFS YMLAEGVGLS GIVSILFTGI VMKRYTFSNL
301: SEASQSFVSS FFHLISSLAE TFTFIYMGFD IAMEQHSWSH VGFILFSILF IGVARAVNVF GCAYLVNLFR QENQKIPMKH QKALWYSGLR GAMAFALALQ
401: SLHDLPEGHG QIIFTATTTI VVVTVLLIGG STGKMLEALE VVGDDLDDSM SEGFEESDHQ YVPPPFSIGA SSDEDTSSSG SRFKMKLKEF HKTTTSFTAL
501: DKNFLTPFFT TNSGDGDGDG E
101: SGFSLQPKPF FSNFGAIVTF AIIGTFVASV VTGGLVYLGG SMYLMYKLPF VECLMFGALI SATDPVTVLS IFQDVGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVNRQS SSGEHFFMVV IRFFETFAGS MSAGVGVGFT SALLFKYAGL DTENLQNLEC CLFVLFPYFS YMLAEGVGLS GIVSILFTGI VMKRYTFSNL
301: SEASQSFVSS FFHLISSLAE TFTFIYMGFD IAMEQHSWSH VGFILFSILF IGVARAVNVF GCAYLVNLFR QENQKIPMKH QKALWYSGLR GAMAFALALQ
401: SLHDLPEGHG QIIFTATTTI VVVTVLLIGG STGKMLEALE VVGDDLDDSM SEGFEESDHQ YVPPPFSIGA SSDEDTSSSG SRFKMKLKEF HKTTTSFTAL
501: DKNFLTPFFT TNSGDGDGDG E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.