Factsheet for HORVU5Hr1G072440.26

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, nucleus

Predictor Summary:

plastid 1
mitochondrion 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, nucleus, plastid
Any Predictor:	golgi, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G259100.2	Wheat	plasma membrane	82.69	86.02
TraesCS5D01G268200.1	Wheat	plasma membrane	83.24	84.96
TraesCS5A01G260700.1	Wheat	plasma membrane	83.24	84.96
KXG35876	Sorghum	plasma membrane	71.82	72.22
HORVU7Hr1G049400.10	Barley	endoplasmic reticulum, plasma membrane	64.27	65.23
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	37.75	65.08
KRH51250	Soybean	plasma membrane	58.93	60.72
KRH11690	Soybean	plasma membrane	59.67	60.67
AT1G79610.1	Thale cress	plasma membrane	59.67	60.56
KRH36691	Soybean	plasma membrane	59.48	60.49
Solyc04g056600.2.1	Tomato	plasma membrane	58.56	59.89
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	54.7	58.93
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	55.06	58.51
AT1G54370.1	Thale cress	plasma membrane	55.43	57.77
CDX79331	Canola	plasma membrane	57.83	56.37
CDX67985	Canola	plasma membrane	57.64	56.19
Zm00001d020892_P003	Maize	plasma membrane	50.64	55.44
HORVU5Hr1G053720.2	Barley	plastid	61.14	55.33
CDX88553	Canola	plasma membrane	58.38	54.37
Os09t0482620-00	Rice	golgi, mitochondrion, peroxisome	24.13	49.81
CDX87370	Canola	plasma membrane	58.56	49.38
VIT_15s0024g00260.t01	Wine grape	plasma membrane	19.71	44.21
HORVU7Hr1G046030.1	Barley	plasma membrane	23.39	24.1
HORVU1Hr1G020360.2	Barley	plasma membrane	21.18	21.06
HORVU2Hr1G021020.4	Barley	plasma membrane	21.92	21.02
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	21.92	18.45

Protein Annotations

MapMan:24.2.8.1.1	UniProt:A0A287RR72	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0015297	GO:GO:0015299
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:HORVU5Hr1G072440	EnsemblPlants:HORVU5Hr1G072440.26
PFAM:PF00999	PANTHER:PTHR10110	PANTHER:PTHR10110:SF111	TMHMM:TMhelix	UniParc:UPI000B4690BF	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:535546239..535553633

Molecular Weight (calculated)

60376.8 Da

IEP (calculated)

7.214

GRAVY (calculated)

0.107

Length

543 amino acids

Sequence
(BLAST)

001: GVATRHSTCP NNRRAKRARE DGPTHRTRRR RRRRGRARAA RRRMETAAHY AAAPHQGAMP GFGGAVDEQQ AAGVGILLQI SMLVLSFVLG HLLRRRKFYY
101: LPEASASLLI GMIVGGFANI SNTQKSTSYL AGLIFIIYRL PLVECMMFGA LVSATDPVTV LSIFQELGTD VNLYALVFGE SVLNDAVAIS LYRTMASMRT
201: SSSGQNLLIV ILRFLENFVG SMSSGIGVGL ISALLFKYAE LGVENLHNLE SCLFVLFPYF SYMLAEGLGL SGIVSILFTG IVMKRYTFYN LSEDSQRFTA
301: RFFHLLSSLA EAFIFIYMGF DIAMERQSWS HIGFIFFSIV FILVARAANV FSCAYILNLA RPPHSQIPRE YQLALWYSGM YCHQTCSSDH QIDMFKFKQL
401: ELDVSCSGLR GAMAFALALQ SVHDLPEGHG ETIFTATTSI VVLTVLLIGG STGTMLEALQ VVGDSNRYRH PYEENFEGSS EEGTPSKNKF QLKLRELRRS
501: STSSFALLDR NYLTPIFTSQ HEDDDDDDDN DDDSCEVLGI AST

Best Arabidopsis Sequence Match ( AT1G54370.1 )
(BLAST)

001: MEEVMISPVE HDPQGQVKQQ QAAGVGILLQ IMMLVLSFVL GHVLRRHRFH YLPEASGSLL IGLIVGILAN ISDTETSIRT WFNFHEEFFF LFLLPPIIFQ
101: SGFSLQPKPF FSNFGAIVTF AIIGTFVASV VTGGLVYLGG SMYLMYKLPF VECLMFGALI SATDPVTVLS IFQDVGTDVN LYALVFGESV LNDAMAISLY
201: RTMSLVNRQS SSGEHFFMVV IRFFETFAGS MSAGVGVGFT SALLFKYAGL DTENLQNLEC CLFVLFPYFS YMLAEGVGLS GIVSILFTGI VMKRYTFSNL
301: SEASQSFVSS FFHLISSLAE TFTFIYMGFD IAMEQHSWSH VGFILFSILF IGVARAVNVF GCAYLVNLFR QENQKIPMKH QKALWYSGLR GAMAFALALQ
401: SLHDLPEGHG QIIFTATTTI VVVTVLLIGG STGKMLEALE VVGDDLDDSM SEGFEESDHQ YVPPPFSIGA SSDEDTSSSG SRFKMKLKEF HKTTTSFTAL
501: DKNFLTPFFT TNSGDGDGDG E

Arabidopsis Description

NHX5Sodium/hydrogen exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8S396]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.