Factsheet for HORVU2Hr1G021020.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G121000.1	Wheat	plasma membrane	91.7	96.47
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	90.64	95.35
Zm00001d022504_P001	Maize	plasma membrane	85.16	89.42
KXG36886	Sorghum	plasma membrane	84.45	89.18
Os07t0666900-01	Rice	vacuole	84.1	88.97
GSMUA_Achr8P21980_001	Banana	plasma membrane	77.39	80.81
GSMUA_Achr11P...	Banana	plasma membrane	76.5	80.63
GSMUA_Achr10P...	Banana	plasma membrane	74.2	77.35
VIT_05s0020g01960.t01	Wine grape	plasma membrane	71.73	75.05
Solyc01g067710.2.1	Tomato	plasma membrane	70.67	74.49
KRH02192	Soybean	plasma membrane	70.49	74.44
PGSC0003DMT400027658	Potato	plasma membrane	70.49	74.3
TraesCS2B01G141900.1	Wheat	plasma membrane	77.21	73.08
VIT_07s0104g01280.t01	Wine grape	plasma membrane	63.96	72.55
Solyc06g008820.2.1	Tomato	plasma membrane	64.66	68.54
AT3G06370.3	Thale cress	plasma membrane	66.25	67.93
PGSC0003DMT400056555	Potato	plasma membrane	30.21	67.86
Bra020755.1-P	Field mustard	plasma membrane	64.49	67.59
CDY24699	Canola	plasma membrane	66.43	67.38
CDY05257	Canola	plasma membrane	66.61	67.32
PGSC0003DMT400056556	Potato	golgi, plasma membrane	36.4	67.32
HORVU1Hr1G020360.2	Barley	plasma membrane	64.66	67.03
KRH50930	Soybean	mitochondrion	70.49	63.33
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	68.2	59.84
HORVU7Hr1G046030.1	Barley	plasma membrane	54.42	58.44
HORVU7Hr1G049400.10	Barley	endoplasmic reticulum, plasma membrane	25.27	26.73
HORVU5Hr1G053720.2	Barley	plastid	25.44	24.0
HORVU5Hr1G072440.26	Barley	golgi, mitochondrion, nucleus, plastid	21.02	21.92

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	UniProt:A0A287HAW1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297	GO:GO:0015299
GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075	GO:GO:0055085
GO:GO:1902600	EnsemblPlantsGene:HORVU2Hr1G021020	EnsemblPlants:HORVU2Hr1G021020.4	InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	TMHMM:TMhelix
UniParc:UPI000B477A9E	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:59025629..59030226

Molecular Weight (calculated)

62420.9 Da

IEP (calculated)

7.815

GRAVY (calculated)

0.598

Length

566 amino acids

Sequence
(BLAST)

001: MAFEVVAAQL ARLSDALATS DHASVVSINL FVALLCACIV LGHLLEENRW LNESITALII GLCTGVVILM TTKGKSSHVL VFSEDLFFIY LLPPIIFNAG
101: FQVKKKQFFR NFMTITLFGA VGTMISFFTI SLAAIAIFSK MNIGTLDVSD FLAIGAIFSA TDSVCTLQVL NQDETPFLYS LVFGEGVVND ATSVVLFNAL
201: QNFDPNQIDA IVILKFLGNF CYLFVSSTFL GVFSGLLSAY IIKKLYIGRF VQPLSTFVLS INVHLDTNLA CCSTYFRHST DREVALMMLM AYLSYMLAEL
301: LDLSGILTVF FCGIVMSHYT WHNVTESSRV TTKHAFATLS FIAETFLFLY VGMDALDIEK WKFASDSPGK SIGISSILLG LVLVGRAAFV FPLSFLSNLT
401: KKTELEKISW RQQIVIWWAG LMRGAVSIAL AYNKFTRSGH TQLHGNAIMI TSTITVVLFS TMLFGILTKP LIRFLLPASS NGDPSEPSSP KSLHSPLLTS
501: MLGSDMEAPL PIVRPSSLRM LITKPTHTIH YYWRKFDDAL MRPMFGGRGF VPYSPGSPTD PNVIVA

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.