Factsheet for TraesCS2B01G141900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G121000.1	Wheat	plasma membrane	74.58	82.9
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	73.58	81.78
Zm00001d022504_P001	Maize	plasma membrane	70.74	78.48
Os07t0666900-01	Rice	vacuole	69.57	77.76
KXG36886	Sorghum	plasma membrane	69.57	77.61
HORVU2Hr1G021020.4	Barley	plasma membrane	73.08	77.21
GSMUA_Achr11P...	Banana	plasma membrane	65.05	72.44
GSMUA_Achr8P21980_001	Banana	plasma membrane	65.38	72.14
PGSC0003DMT400056555	Potato	plasma membrane	28.93	68.65
GSMUA_Achr10P...	Banana	plasma membrane	62.04	68.32
VIT_05s0020g01960.t01	Wine grape	plasma membrane	61.54	68.02
PGSC0003DMT400027658	Potato	plasma membrane	60.87	67.78
Solyc01g067710.2.1	Tomato	plasma membrane	60.87	67.78
KRH02192	Soybean	plasma membrane	60.54	67.54
VIT_07s0104g01280.t01	Wine grape	plasma membrane	54.35	65.13
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	54.18	63.28
AT3G06370.3	Thale cress	plasma membrane	58.19	63.04
Solyc06g008820.2.1	Tomato	plasma membrane	56.19	62.92
TraesCS1B01G112700.1	Wheat	plasma membrane	57.02	62.45
Bra020755.1-P	Field mustard	plasma membrane	55.52	61.48
CDY24699	Canola	plasma membrane	57.36	61.47
CDY05257	Canola	plasma membrane	57.36	61.25
KRH50930	Soybean	mitochondrion	60.2	57.14
PGSC0003DMT400056556	Potato	golgi, plasma membrane	29.1	56.86
TraesCS7B01G191300.1	Wheat	plasma membrane	48.16	54.65
TraesCS5B01G259100.2	Wheat	plasma membrane	22.58	25.86
TraesCS7B01G149100.1	Wheat	plasma membrane	22.58	25.14
TraesCS5B01G173800.1	Wheat	plasma membrane	22.24	24.91

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020
GO:GO:0016021	GO:GO:0055075	GO:GO:0055085	InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	PFAM:PD968187	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G141900	EnsemblPlants:TraesCS2B01G141900.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:108238124..108241608

Molecular Weight (calculated)

66394.5 Da

IEP (calculated)

9.299

GRAVY (calculated)

0.393

Length

598 amino acids

Sequence
(BLAST)

001: MGYQVVAAQL ARLSGALGTS DHASVVSITL FVALLCACIV LGHLLEENRW LNESITALII GLCTGVVILM TTKGKSSHVL VFSEDLFFIY LLPPIIFNAG
101: FQVKKKQFFR NFMTITLFGA VGTMMSFFTI SLAAIAIFSR MNIGTLDVSD FLAIGAIFSA TDSVCTLQVL NQDETPFLYS LVFGEGVVND ATSVVLFNAL
201: QNFDPNQIDA IVILKFLGNF CYLFVSSTFL GVFTGLLSAY VIKKLYIGRH STDREVALVM LMAYLSYMLA ELLDLSGILT VFFCGIVMSH YTWHNVTESS
301: RVTTKHAFAT LSFIAETFLF LYVGMDALDI EKWKFASDSP GKSIGISSIL LGLVLVGRAA FVFPLSFLSN LTKKTELEKI SWRQQIVIWW AGLMRGAVSI
401: ALAYNKFTRS GHTQLHGNAI MITSTITVVL FSTMVSHLMF NPYPMQCTSL SSEVILNVST VLKPSDIMYV SCLPAVWHFD KASDPVPAAR VEQWRCLRPR
501: ITEVPALSSP HKPARLGPGG ASPHREAFQP PDAHHQADPH HPLLLAQVRR RADAPDVRRA RVCALLPRIT HRSERTRGMN VVKKQRRSHY SFRRHSEL

Best Arabidopsis Sequence Match ( AT3G05030.3 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVRYLPLRFG LLNVFSLQRC CQ

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.