Factsheet for TraesCS2A01G121000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	98.88	98.88
HORVU2Hr1G021020.4	Barley	plasma membrane	96.47	91.7
Zm00001d022504_P001	Maize	plasma membrane	89.03	88.87
KXG36886	Sorghum	plasma membrane	88.1	88.43
Os07t0666900-01	Rice	vacuole	87.55	88.04
GSMUA_Achr8P21980_001	Banana	plasma membrane	79.74	79.15
GSMUA_Achr11P...	Banana	plasma membrane	78.62	78.77
GSMUA_Achr10P...	Banana	plasma membrane	76.39	75.69
TraesCS2B01G141900.1	Wheat	plasma membrane	82.9	74.58
VIT_05s0020g01960.t01	Wine grape	plasma membrane	73.98	73.57
PGSC0003DMT400027658	Potato	plasma membrane	73.42	73.56
Solyc01g067710.2.1	Tomato	plasma membrane	73.42	73.56
KRH02192	Soybean	plasma membrane	72.86	73.13
VIT_07s0104g01280.t01	Wine grape	plasma membrane	66.36	71.54
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	71.56	71.3
Solyc06g008820.2.1	Tomato	plasma membrane	67.66	68.16
PGSC0003DMT400056555	Potato	plasma membrane	31.78	67.86
AT3G06370.3	Thale cress	plasma membrane	69.14	67.39
TraesCS1A01G102300.1	Wheat	plasma membrane	67.66	66.67
Bra020755.1-P	Field mustard	plasma membrane	66.73	66.48
PGSC0003DMT400056556	Potato	golgi, plasma membrane	37.73	66.34
CDY24699	Canola	plasma membrane	68.77	66.31
CDY05257	Canola	plasma membrane	68.96	66.25
KRH50930	Soybean	mitochondrion	72.68	62.06
TraesCS7A01G228400.1	Wheat	plasma membrane	57.06	58.25
TraesCS5A01G176100.3	Wheat	plasma membrane	26.77	26.92
TraesCS5A01G260700.1	Wheat	plasma membrane	26.58	26.88
TraesCS7A01G242300.1	Wheat	plasma membrane	26.39	26.2

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020
GO:GO:0016021	GO:GO:0055075	GO:GO:0055085	InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	TIGRFAMs:TIGR00840
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G121000	EnsemblPlants:TraesCS2A01G121000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:70877414..70880920

Molecular Weight (calculated)

59115.9 Da

IEP (calculated)

8.351

GRAVY (calculated)

0.591

Length

538 amino acids

Sequence
(BLAST)

001: MGYQVVAAQL ARLSGALGTS DHASVVSITL FVALLCACIV LGHLLEENRW LNESITALII GLCTGVVILM TTKGKSSHVL VFSEDLFFIY LLPPIIFNAG
101: FQVKKKQFFR NFMTITLFGA VGTMMSFFTI SLAAIAIFSR MNIGTLDVSD FLAIGAIFSA TDSVCTLQVL NQDETPFLYS LVFGEGVVND ATSVVLFNAL
201: QNFDPNQIDA IVILKFLGNF CYLFVSSTFL GVFTGLLSAY VIKKLYIGRH STDREVALVM LMAYLSYMLA ELLDLSGILT VFFCGIVMSH YTWHNVTESS
301: RVTTKHAFAT LSFIAETFLF LYVGMDALDI EKWKFASDSP GKSIGISSIL LGLVLVGRAA FVFPLSFLSN LTKKTELEKI SWRQQIVIWW AGLMRGAVSI
401: ALAYNKFTRS GHTQLHGNAI MITSTITVVL FSTMLFGILT KPLIRFLLPA SSNGAASDPA SPKSLHSPLL TSQLGSDLEA PLPIVRPSSL RMLITKPTHT
501: IHYYWRKFDD ALMRPMFGGR GFVPYSPGSP TDPNVLVE

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.