Factsheet for Zm00001d022504_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36886	Sorghum	plasma membrane	96.1	96.64
Os07t0666900-01	Rice	vacuole	91.65	92.34
TraesCS2A01G121000.1	Wheat	plasma membrane	88.87	89.03
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	87.76	87.92
HORVU2Hr1G021020.4	Barley	plasma membrane	89.42	85.16
GSMUA_Achr8P21980_001	Banana	plasma membrane	83.67	83.21
GSMUA_Achr11P...	Banana	plasma membrane	81.63	81.94
GSMUA_Achr10P...	Banana	plasma membrane	79.41	78.82
PGSC0003DMT400027658	Potato	plasma membrane	76.62	76.91
Solyc01g067710.2.1	Tomato	plasma membrane	76.62	76.91
VIT_05s0020g01960.t01	Wine grape	plasma membrane	77.18	76.89
KRH02192	Soybean	plasma membrane	75.88	76.31
VIT_07s0104g01280.t01	Wine grape	plasma membrane	68.46	73.95
Zm00001d048732_P005	Maize	plasma membrane	73.65	72.71
TraesCS2B01G141900.1	Wheat	plasma membrane	78.48	70.74
PGSC0003DMT400056555	Potato	plasma membrane	33.02	70.63
Solyc06g008820.2.1	Tomato	plasma membrane	69.2	69.85
AT3G06370.3	Thale cress	plasma membrane	70.87	69.2
Zm00001d024832_P002	Maize	plasma membrane	71.06	68.52
Bra020755.1-P	Field mustard	plasma membrane	68.27	68.15
PGSC0003DMT400056556	Potato	golgi, plasma membrane	38.59	67.97
CDY24699	Canola	plasma membrane	70.32	67.92
CDY05257	Canola	plasma membrane	70.5	67.86
KRH50930	Soybean	mitochondrion	75.88	64.92
Zm00001d045883_P001	Maize	plasma membrane	59.37	58.72
Zm00001d028330_P048	Maize	plasma membrane	51.39	51.3
Zm00001d041859_P001	Maize	mitochondrion	13.36	47.37
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	45.64	34.94
Zm00001d048459_P007	Maize	plasma membrane	29.13	32.78
Zm00001d021844_P003	Maize	mitochondrion	48.61	27.9
Zm00001d025052_P007	Maize	plasma membrane	26.16	27.12
Zm00001d019978_P001	Maize	plasma membrane	26.53	26.68
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	31.73	21.7
Zm00001d020892_P003	Maize	plasma membrane	16.14	17.54

Protein Annotations

Gene3D:1.20.1530.20	EntrezGene:103633540	MapMan:24.2.8.1.1	UniProt:A0A1D6INM5	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725
GO:GO:0055075	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant
InterPro:NaH_exchanger	ProteinID:ONM60860.1	PFAM:PD968187	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF117	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI000221072B	EnsemblPlantsGene:Zm00001d022504	EnsemblPlants:Zm00001d022504_P001
EnsemblPlants:Zm00001d022504_T001	SEG:seg	:	:	:	:

Description

Sodium/hydrogen exchanger

Coordinates

chr7:-:179047417..179052457

Molecular Weight (calculated)

59182.9 Da

IEP (calculated)

7.645

GRAVY (calculated)

0.586

Length

539 amino acids

Sequence
(BLAST)

001: MGLGVVAELV RLGVLSSTSD HASVVSINLF VALLCACIVL GHLLEENRWV NESITALIIG LCTGVVILLT TKGKSSHILV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FMTITLFGAV GTMISFFTIS LGAIAIFSRM NIGTLDVGDF LAIGAIFSAT DSVCTLQVLH QDETPFLYSL VFGEGVVNDA TSVVLFNALQ
201: NFDLNHIDVA VVLNFLGNFC YLFVSSTLLG VFTGLLSAYI IKKLYIGRHS TDREVALMML MAYLSYMLAE LLDLSGILTV FFCGIVMSHY TWHNVTESSR
301: VTTKHAFATL SFIAETFLFL YVGMDALDIE KWEFASDSPG KSIGISSILL GLVLVGRAAF VFPLSFLSNL TKKSPLEKIT FRQQIVIWWA GLMRGAVSIA
401: LAYNKFTRSG HTELHGNAIM ITSTITVVLF STMVFGMMTK PLIRLLLPAC SNTATSEPSS PKSLHSPLLT SMQGSDIETG SAQIVRPSSL RMLLSKPTHT
501: VHYYWRKFDD ALMRPMFGGR GFVPFSPGSP TEQSVHDGR

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.