Factsheet for VIT_07s0104g01280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01960.t01	Wine grape	plasma membrane	79.16	73.01
GSMUA_Achr11P...	Banana	plasma membrane	76.55	71.14
GSMUA_Achr8P21980_001	Banana	plasma membrane	76.95	70.85
VIT_14s0030g00710.t01	Wine grape	plasma membrane	76.15	70.5
GSMUA_Achr8P06790_001	Banana	plasma membrane	75.55	70.07
GSMUA_Achr3P23840_001	Banana	plasma membrane	75.15	69.83
Zm00001d022504_P001	Maize	plasma membrane	73.95	68.46
KXG36886	Sorghum	plasma membrane	73.15	68.1
PGSC0003DMT400056556	Potato	golgi, plasma membrane	41.68	67.97
Os07t0666900-01	Rice	vacuole	72.34	67.48
GSMUA_Achr10P...	Banana	plasma membrane	73.15	67.22
TraesCS2A01G121000.1	Wheat	plasma membrane	71.54	66.36
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	70.54	65.43
Solyc06g008820.2.1	Tomato	plasma membrane	69.94	65.36
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.34	65.0
Os11t0648000-01	Rice	plasma membrane	70.94	64.95
GSMUA_Achr6P20250_001	Banana	plasma membrane	74.35	64.75
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.14	64.69
GSMUA_Achr2P01560_001	Banana	plasma membrane	69.74	64.68
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	69.54	64.14
HORVU2Hr1G021020.4	Barley	plasma membrane	72.55	63.96
Zm00001d048732_P005	Maize	plasma membrane	69.94	63.92
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	65.53	63.87
KXG21297	Sorghum	plasma membrane	69.74	63.74
Os05t0148600-01	Rice	plasma membrane	69.14	63.42
Zm00001d024832_P002	Maize	plasma membrane	69.94	62.43
TraesCS1D01G093900.1	Wheat	plasma membrane	68.14	62.27
TraesCS1B01G112700.1	Wheat	plasma membrane	68.14	62.27
TraesCS1A01G102300.1	Wheat	plasma membrane	68.14	62.27
HORVU1Hr1G020360.2	Barley	plasma membrane	67.74	61.9
PGSC0003DMT400056555	Potato	plasma membrane	30.86	61.11
VIT_14s0128g00020.t01	Wine grape	plasma membrane	62.73	57.86
VIT_19s0090g01480.t01	Wine grape	plasma membrane	58.72	56.24
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	70.34	54.42
TraesCS2B01G141900.1	Wheat	plasma membrane	65.13	54.35
Zm00001d028330_P048	Maize	plasma membrane	45.49	42.04
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	41.08	29.12
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	16.23	25.71
Zm00001d048459_P007	Maize	plasma membrane	24.65	25.68
Zm00001d021844_P003	Maize	mitochondrion	43.49	23.11
Zm00001d025052_P007	Maize	plasma membrane	22.24	21.35
VIT_15s0024g00260.t01	Wine grape	plasma membrane	10.22	21.07
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	28.06	17.77

Protein Annotations

MapMan:24.2.8.1.1	ProteinID:CCB56776	ProteinID:CCB56776.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	UniProt:F6HQ20
EMBL:FN596005	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0008150	GO:GO:0009987
GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0015386	GO:GO:0016020	GO:GO:0016021
GO:GO:0019725	GO:GO:0035725	GO:GO:0051453	GO:GO:0055085	GO:GO:0071805	GO:GO:0098719
GO:GO:1902600	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF155
TMHMM:TMhelix	UniParc:UPI0002108B43	ArrayExpress:VIT_07s0104g01280	EnsemblPlantsGene:VIT_07s0104g01280	EnsemblPlants:VIT_07s0104g01280.t01	SEG:seg

Description

No Description!

Coordinates

chr7:-:2309018..2315931

Molecular Weight (calculated)

55245.1 Da

IEP (calculated)

7.928

GRAVY (calculated)

0.519

Length

499 amino acids

Sequence
(BLAST)

001: MGLNSLAGLG MRSTSDQVSI DAITLFVALL CACIVIGHLL EEYRWMNESI TALFIGLCTG IVLLLTTGGK ISLILLFNEE LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFMTI ILFGAIGTLI SFGIISLGAI QLFKKLDIGF LEIGDYLAIG AIFSATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVI GLLSAYIMKK
201: LYFGRHSTDR EVALMIVMAY LSYIMAELFY LSGILTVFFC GIVMSHYTWH NVTESSRVTT KHTFATLSFV SEIFIFLYVG IDALDIEKWR VVSNSPGTSI
301: GVSSILLGLV LIGRAAFVFP LSFLSNLTKK SESDKIGFKQ QITIWWAGLM RGAVSVALAY NQFTMSGHTQ LRGNAIMITS TITIVLFSTL VFGLMTKPLI
401: SFLLPPPKYF SSMMSSEPSS PKSFSMPLLA NGQDPDIEGD SHNTPPPTNL RMLWTTPTHT VHHYWRKFDN AYMRPVFGGR GFVPYVATSL TERNAPQLQ

Best Arabidopsis Sequence Match ( AT5G27150.1 )
(BLAST)

001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA

Arabidopsis Description

NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.