CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024832_P002	Maize	plasma membrane	97.8	95.53
Os05t0148600-01	Rice	plasma membrane	88.83	89.15
TraesCS1A01G102300.1	Wheat	plasma membrane	86.26	86.26
TraesCS1D01G093900.1	Wheat	plasma membrane	86.08	86.08
TraesCS1B01G112700.1	Wheat	plasma membrane	85.71	85.71
HORVU1Hr1G020360.2	Barley	plasma membrane	84.98	84.98
GSMUA_Achr8P06790_001	Banana	plasma membrane	72.71	73.79
GSMUA_Achr3P23840_001	Banana	plasma membrane	71.43	72.63
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	70.33	70.98
KXG36886	Sorghum	plasma membrane	69.6	70.9
PGSC0003DMT400027658	Potato	plasma membrane	69.23	70.39
Solyc01g067710.2.1	Tomato	plasma membrane	69.05	70.2
VIT_07s0104g01280.t01	Wine grape	plasma membrane	63.74	69.74
VIT_05s0020g01960.t01	Wine grape	plasma membrane	68.5	69.13
KRH02192	Soybean	plasma membrane	67.4	68.66
PGSC0003DMT400056555	Potato	plasma membrane	31.68	68.65
GSMUA_Achr6P20250_001	Banana	plasma membrane	70.88	67.54
GSMUA_Achr2P01560_001	Banana	plasma membrane	65.38	66.36
Solyc06g008820.2.1	Tomato	plasma membrane	63.55	64.98
AT3G06370.3	Thale cress	plasma membrane	64.84	64.13
Bra020755.1-P	Field mustard	plasma membrane	61.9	62.59
CDY24699	Canola	plasma membrane	63.74	62.37
CDY05257	Canola	plasma membrane	63.74	62.14
PGSC0003DMT400056556	Potato	golgi, plasma membrane	33.88	60.46
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	56.59	58.3
KRH50930	Soybean	mitochondrion	67.22	58.25
KXG35307	Sorghum	plastid	26.74	27.24
KXG35876	Sorghum	plasma membrane	25.46	25.74

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	UniProt:A0A1B6P6G8	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021
GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770	EnsemblPlants:KXG21297	ProteinID:KXG21297
ProteinID:KXG21297.1	ProteinID:KXG21298.1	InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084
PANTHER:PTHR10110	PANTHER:PTHR10110:SF116	EnsemblPlantsGene:SORBI_3009G042700	TMHMM:TMhelix	UniParc:UPI00081ABDFC	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:4071948..4078347

Molecular Weight (calculated)

59823.2 Da

IEP (calculated)

8.444

GRAVY (calculated)

0.678

Length

546 amino acids

Sequence
(BLAST)

001: MGLGLGALLK SGALSVSDYD AIVSINIFIA LLCSCIVIGH LLEGNRWVNE SITALVMGLI TGGVILLVTN GTNSRILVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFI TIILFGAVGT LISFVIISLG AMGLFKKLDV GPLELGDYLA IGAIFSATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIENL
201: DIANFDAIVL LNFVGKFLYL FFTSTILGVA TGLLSAYIIK KLCFARHSTD REVSIMILMA YLSYMLSMLL DLSGILTVFF CGIVMSHYTW HNVTESSRVT
301: TKHTFATLSF IAEIFLFLYV GMDALDIEKW KLASSSPKKP IALSAIILGL VMVGRAAFVF PLSFLSNLSK KEARPKISFK QQVIIWWAGL MRGAVSIALA
401: YNKFTSSGHT EVRVNAIMIT STVIVVLFST MVFGLLTKPL LSLLIPPRTG LNTSSLLSSQ SILDPLLTSM VGSDFDVGQI NSPQYNLQFI LTAPTRSVHR
501: LWRKFDDRFM RPMFGGRGFV PFVPGSPVER SVPEPHLGTV TEAEHS

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.