CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048732_P005	Maize	plasma membrane	95.01	94.14
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	86.32	86.32
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	81.52	86.13
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.77	85.93
Os11t0648000-01	Rice	plasma membrane	85.4	84.77
GSMUA_Achr3P23840_001	Banana	plasma membrane	73.2	73.74
KXG36886	Sorghum	plasma membrane	72.83	73.51
GSMUA_Achr8P06790_001	Banana	plasma membrane	73.01	73.42
PGSC0003DMT400027658	Potato	plasma membrane	71.9	72.44
Solyc01g067710.2.1	Tomato	plasma membrane	71.9	72.44
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	86.32	72.4
VIT_05s0020g01960.t01	Wine grape	plasma membrane	70.43	70.43
KRH02192	Soybean	plasma membrane	69.69	70.34
KXG21297	Sorghum	plasma membrane	70.98	70.33
VIT_07s0104g01280.t01	Wine grape	plasma membrane	64.14	69.54
GSMUA_Achr2P01560_001	Banana	plasma membrane	67.1	67.47
GSMUA_Achr6P20250_001	Banana	plasma membrane	70.24	66.32
Solyc06g008820.2.1	Tomato	plasma membrane	64.33	65.17
PGSC0003DMT400056555	Potato	plasma membrane	30.13	64.68
PGSC0003DMT400056556	Potato	golgi, plasma membrane	36.23	64.05
AT3G06370.3	Thale cress	plasma membrane	65.25	63.95
CDY24699	Canola	plasma membrane	64.51	62.54
Bra020755.1-P	Field mustard	plasma membrane	62.29	62.41
CDY05257	Canola	plasma membrane	64.33	62.14
Zm00001d028330_P048	Maize	plasma membrane	60.81	60.93
KRH50930	Soybean	mitochondrion	69.32	59.52
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	55.45	56.6
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	52.68	40.48
Zm00001d048459_P007	Maize	plasma membrane	33.64	38.0
Zm00001d025052_P007	Maize	plasma membrane	30.68	31.92
Zm00001d021844_P003	Maize	mitochondrion	54.9	31.63
KXG35307	Sorghum	plastid	26.99	27.24
KXG35876	Sorghum	plasma membrane	26.25	26.3
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	38.08	26.14

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EntrezGene:8082042	UniProt:C5Y722	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1
EnsemblPlants:EES10186	ProteinID:EES10186	ProteinID:EES10186.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886
GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0015297	GO:GO:0015299
GO:GO:0015385	GO:GO:0015386	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0051453
GO:GO:0055075	GO:GO:0055085	GO:GO:0071805	GO:GO:0098719	GO:GO:1902600	InterPro:IPR038770
InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF154
EnsemblPlantsGene:SORBI_3005G201000	unigene:Sbi.5423	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI0001A86BF1	RefSeq:XP_002451198.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:68651491..68655704

Molecular Weight (calculated)

59065.5 Da

IEP (calculated)

9.316

GRAVY (calculated)

0.534

Length

541 amino acids

Sequence
(BLAST)

001: MGLMALGDPP ADYASIAAVG LFVALMCVCI IVGHLLEENR WMNESITALF IGLGTGAVIL FASSGKHSRV LQFSEDLFFI YLLPPIIFNA GFQVKKKQFF
101: RNFITITLFG AVGTLISFTV ISLGALGLVS RLNIGALELG DYLALGAIFS ATDSVCTLQV LSQDETPFLY SLVFGEGVVN DATSVVLFNA IQNFDLGNIS
201: GAKLLNFIGS FLYLFGTSTI LGVASGLLSA YIIKKLYFGR HSTDREVSIM MLMAYLSYML AELLDLSGIL TVFFCGIVMS HYTWHNVTES SRVTTKHAFA
301: TLSFIAETFL FLYVGMDALD IEKWKIVSQT YSPVKSVALS STILALVLVS RAAFVFPLSF LSNLTKKTPN GKISFRQQVI VWWAGLMRGA VSIALAYNKF
401: TRSGHTQQPS NAIMITSTIT VVLFSTIVFG LLTKPLIRLL IPPRHLSREA SALSEPSSPK SFFEQLATNS PGLPDIENGI SLRRPTSLRL LLASPARSVH
501: YYWRKFDDGF MRPVFGGRGF VPFHPGSPTE SSVPLLAGNG N

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.