Factsheet for HORVU4Hr1G033760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G147600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.17	97.97
TraesCS4B01G125700.1	Wheat	golgi, plasma membrane, vacuole	77.36	97.46
TraesCS4A01G145300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.55	97.41
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	72.4	86.32
Zm00001d048732_P005	Maize	plasma membrane	72.87	86.08
Os11t0648000-01	Rice	plasma membrane	71.78	84.95
GSMUA_Achr8P06790_001	Banana	plasma membrane	60.47	72.49
GSMUA_Achr3P23840_001	Banana	plasma membrane	60.16	72.25
Solyc01g067710.2.1	Tomato	plasma membrane	59.84	71.88
VIT_05s0020g01960.t01	Wine grape	plasma membrane	60.0	71.53
PGSC0003DMT400027658	Potato	plasma membrane	59.53	71.51
VIT_07s0104g01280.t01	Wine grape	plasma membrane	54.42	70.34
KRH02192	Soybean	plasma membrane	58.14	69.96
HORVU1Hr1G020360.2	Barley	plasma membrane	58.91	69.6
HORVU2Hr1G021020.4	Barley	plasma membrane	59.84	68.2
GSMUA_Achr2P01560_001	Banana	plasma membrane	56.59	67.84
GSMUA_Achr6P20250_001	Banana	plasma membrane	58.6	65.97
Solyc06g008820.2.1	Tomato	plasma membrane	53.64	64.79
PGSC0003DMT400056555	Potato	plasma membrane	25.27	64.68
AT3G06370.3	Thale cress	plasma membrane	54.88	64.13
PGSC0003DMT400056556	Potato	golgi, plasma membrane	30.39	64.05
CDY24699	Canola	plasma membrane	54.26	62.72
CDY05257	Canola	plasma membrane	54.42	62.68
Bra020755.1-P	Field mustard	plasma membrane	52.4	62.59
KRH50930	Soybean	mitochondrion	59.38	60.79
HORVU7Hr1G046030.1	Barley	plasma membrane	46.2	56.55
Zm00001d028330_P048	Maize	plasma membrane	46.36	55.37
Zm00001d026118_P021	Maize	nucleus, peroxisome, plasma membrane	40.93	37.5
Zm00001d048459_P007	Maize	plasma membrane	26.98	36.33
Zm00001d025052_P007	Maize	plasma membrane	24.5	30.38
Zm00001d021844_P003	Maize	mitochondrion	43.1	29.61
HORVU7Hr1G049400.10	Barley	endoplasmic reticulum, plasma membrane	23.26	28.04
HORVU5Hr1G053720.2	Barley	plastid	23.26	25.0
Zm00001d003728_P056	Maize	cytosol, plasma membrane, vacuole	29.46	24.11
HORVU5Hr1G072440.26	Barley	golgi, mitochondrion, nucleus, plastid	18.45	21.92

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	UniProt:A0A287NRK5	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814
GO:GO:0006885	GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020
GO:GO:0016021	GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:HORVU4Hr1G033760	EnsemblPlants:HORVU4Hr1G033760.1
InterPro:IPR038770	InterPro:Na+/solute_symporter_sf	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF154	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI000B46CE25	SEG:seg	:

Description

Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A287NRK5]

Coordinates

chrchr4H:-:238472323..238482634

Molecular Weight (calculated)

70805.3 Da

IEP (calculated)

10.255

GRAVY (calculated)

0.402

Length

645 amino acids

Sequence
(BLAST)

001: RNRGGVRPPH VAHHKNPQTN FLNLLHVSSR RRFPPHLFPP PPALAAKAPP LPRPAGRSLP LRRSSRPLSC NTRLLLSVWT SKAGVGEGKA QLVFHRLISV
101: LGGGMMGLGL GDPPADYGSI MAVGLFVALM CICIIVGHLL EENRWMNEST TALLLGLGAG TVILFASSGK NSRLMVFSED LFFIYLLPPI IFNAGFQVKK
201: KQFFRNFMTI TLFAVVGTLI SFSIISLGAM GLVSRLNIGA LELGDYLALG AIFSATDSVC TLQVLSQDET PFLYSLVFGE GVVNDATSVV LFNAIQNFDL
301: GNFSSLKFLQ FIGNFLYLFG ASTFLGVSSG LLSAYVIKKL YFGRHSTDRE VAIMMLMAYL SYMLAELLDL SGILTVFFCG IVMSHYTWHN VTESSRVTTK
401: HAFATLSFIS ETFLFLYVGM DALDIEKWKI VSETYSPMKS IALSSIILAL VLVARAAFVF PLSYLSNLTK KTPGEKISVR QQVIIWWAGL MRGAVSIALA
501: YNKFAKSGHT QLPSNAIMIT STIIIVLFST IVFGLLTKPL IRLLIPARHL TREVSALSEP SSPKSFLEQL TVNGPETDVE NSVSIRRPTS LRMLLASPTR
601: SVHHYWRKFD NAFMRPMFGG RGFVPFVPGS PTESSLPLLA HGSEN

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.