Factsheet for HORVU5Hr1G053720.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G173800.1	Wheat	plasma membrane	88.5	99.44
TraesCS5D01G180800.1	Wheat	plasma membrane	88.33	99.25
TraesCS5A01G176100.3	Wheat	plasma membrane	88.33	99.07
KXG35307	Sorghum	plastid	83.5	93.47
Zm00001d019978_P001	Maize	plasma membrane	83.17	93.1
Os09t0286400-01	Rice	plasma membrane	81.0	90.84
KRH11690	Soybean	plasma membrane	69.5	78.09
KRH51250	Soybean	plasma membrane	68.17	77.61
KRH36691	Soybean	plasma membrane	68.67	77.15
Solyc04g056600.2.1	Tomato	plasma membrane	67.67	76.46
AT1G79610.1	Thale cress	plasma membrane	67.33	75.51
GSMUA_Achr2P05520_001	Banana	plasma membrane	30.5	74.09
AT1G54370.1	Thale cress	plasma membrane	64.33	74.09
VIT_15s0024g00280.t01	Wine grape	golgi, plasma membrane	38.67	73.65
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	61.5	72.21
CDX79331	Canola	plasma membrane	66.33	71.45
CDX67985	Canola	plasma membrane	66.17	71.27
VIT_15s0024g00260.t01	Wine grape	plasma membrane	28.5	70.66
HORVU7Hr1G049400.10	Barley	endoplasmic reticulum, plasma membrane	61.83	69.35
CDX88553	Canola	plasma membrane	65.17	67.07
CDX87370	Canola	plasma membrane	66.0	61.49
HORVU5Hr1G072440.26	Barley	golgi, mitochondrion, nucleus, plastid	55.33	61.14
HORVU7Hr1G046030.1	Barley	plasma membrane	24.17	27.51
HORVU1Hr1G020360.2	Barley	plasma membrane	23.17	25.46
HORVU2Hr1G021020.4	Barley	plasma membrane	24.0	25.44
HORVU4Hr1G033760.1	Barley	mitochondrion, plastid	25.0	23.26

Protein Annotations

MapMan:24.2.8.1.1	UniProt:A0A287R9C2	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021
GO:GO:0035725	GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:HORVU5Hr1G053720	EnsemblPlants:HORVU5Hr1G053720.2	InterPro:NaH_exchanger
PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110	PANTHER:PTHR10110:SF127	TIGRFAMs:TIGR00840	TMHMM:TMhelix
UniParc:UPI000B47BE0C	SEG:seg	:	:	:	:

Description

Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A287R9C2]

Coordinates

chrchr5H:-:421877808..421887044

Molecular Weight (calculated)

65633.6 Da

IEP (calculated)

6.192

GRAVY (calculated)

0.299

Length

600 amino acids

Sequence
(BLAST)

001: ARTKKRNNSQ ATPGRERNAL SVLESCGPTN KSHFPSFLPL RQSSGRPRLT DPLVAGRRPQ RFSPAGMAME LSMALAAPPG GGLLAPPPPA PPGKEQQVAG
101: VGILLQISML VLSFVLGHVL RRHRFYYLPE ASASLLIGLV VGGLANISNT ETNTRTWFNF HEEFFFLFLL PPIIFQSGFS LSPKPFFANF GAIVTFAILG
201: TFIASIVTGM LVYLGGLTFL MYKLPLVECL MFGALISATD PVTVLSIFQE LGSDVNLYAL VFGESVLNDA MAISLYRTMS SVRSNAAGGE NIFMMILQFL
301: EIFVGSMSSG VGVGFISSLL FKYAGLDIDN LQNLECCLFV LFPYFSYMLA EGLGLSGIVS ILFTGMVMKH YTYSNLSDNS QRFVSAFFHL LSSLAETFVF
401: IYMGFDIAME EHSWSHVGFI IFSIIFIIVA RAANVFSCAY LVNISRPEHR RIPLNHQKAL CFSGLRGAMA FALALQSVHE LPEGHGKTIL TATTAIVVLT
501: VLLIGGSTGT MLEALDVIGD ENTSIETYED NNGYIPPTYE EGTSSGGGLR MKLKEFHKST TSFTALDKNY LTPFFTSQTD DDADDFGDQP QNQRQGFYDQ

Best Arabidopsis Sequence Match ( AT1G79610.1 )
(BLAST)

001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG

Arabidopsis Description

NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.