Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g067710.2.1 | Tomato | plasma membrane | 98.7 | 98.7 |
| VIT_05s0020g01960.t01 | Wine grape | plasma membrane | 80.45 | 79.85 |
| GSMUA_Achr8P21980_001 | Banana | plasma membrane | 79.7 | 78.97 |
| GSMUA_Achr11P... | Banana | plasma membrane | 78.4 | 78.4 |
| GSMUA_Achr8P06790_001 | Banana | plasma membrane | 77.65 | 77.51 |
| PGSC0003DMT400057913 | Potato | plasma membrane | 77.09 | 77.24 |
| Zm00001d022504_P001 | Maize | plasma membrane | 76.91 | 76.62 |
| KRH02192 | Soybean | plasma membrane | 76.35 | 76.49 |
| GSMUA_Achr3P23840_001 | Banana | plasma membrane | 76.16 | 76.16 |
| KXG36886 | Sorghum | plasma membrane | 75.79 | 75.93 |
| Os07t0666900-01 | Rice | vacuole | 74.86 | 75.14 |
| GSMUA_Achr10P... | Banana | plasma membrane | 75.61 | 74.77 |
| TraesCS2A01G121000.1 | Wheat | plasma membrane | 73.56 | 73.42 |
| TraesCS2D01G123000.1 | Wheat | plasma membrane, vacuole | 73.0 | 72.86 |
| EES10186 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 72.44 | 71.9 |
| Os11t0648000-01 | Rice | plasma membrane | 72.25 | 71.19 |
| TraesCS4D01G147600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 71.69 | 71.16 |
| TraesCS4A01G145300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 71.32 | 70.93 |
| GSMUA_Achr2P01560_001 | Banana | plasma membrane | 70.95 | 70.82 |
| PGSC0003DMT400056555 | Potato | plasma membrane | 33.15 | 70.63 |
| Zm00001d048732_P005 | Maize | plasma membrane | 71.69 | 70.51 |
| TraesCS4B01G125700.1 | Wheat | golgi, plasma membrane, vacuole | 67.23 | 70.51 |
| HORVU2Hr1G021020.4 | Barley | plasma membrane | 74.3 | 70.49 |
| Os05t0148600-01 | Rice | plasma membrane | 70.95 | 70.04 |
| GSMUA_Achr6P20250_001 | Banana | plasma membrane | 74.67 | 69.98 |
| AT3G06370.3 | Thale cress | plasma membrane | 71.88 | 69.93 |
| KXG21297 | Sorghum | plasma membrane | 70.39 | 69.23 |
| Bra020755.1-P | Field mustard | plasma membrane | 68.72 | 68.33 |
| CDY24699 | Canola | plasma membrane | 70.95 | 68.28 |
| CDY05257 | Canola | plasma membrane | 71.14 | 68.21 |
| TraesCS1D01G093900.1 | Wheat | plasma membrane | 69.27 | 68.13 |
| TraesCS1A01G102300.1 | Wheat | plasma membrane | 69.27 | 68.13 |
| TraesCS1B01G112700.1 | Wheat | plasma membrane | 69.27 | 68.13 |
| HORVU1Hr1G020360.2 | Barley | plasma membrane | 69.09 | 67.95 |
| PGSC0003DMT400056556 | Potato | golgi, plasma membrane | 38.55 | 67.65 |
| Zm00001d024832_P002 | Maize | plasma membrane | 70.39 | 67.62 |
| KRH50930 | Soybean | mitochondrion | 76.35 | 65.08 |
| TraesCS2B01G141900.1 | Wheat | plasma membrane | 67.78 | 60.87 |
| HORVU4Hr1G033760.1 | Barley | mitochondrion, plastid | 71.51 | 59.53 |
| PGSC0003DMT400085382 | Potato | plasma membrane | 58.47 | 57.3 |
| Zm00001d028330_P048 | Maize | plasma membrane | 49.35 | 49.07 |
| Zm00001d048459_P007 | Maize | plasma membrane | 29.24 | 32.78 |
| Zm00001d026118_P021 | Maize | nucleus, peroxisome, plasma membrane | 42.64 | 32.53 |
| Zm00001d025052_P007 | Maize | plasma membrane | 26.44 | 27.31 |
| Zm00001d021844_P003 | Maize | mitochondrion | 45.25 | 25.88 |
| Zm00001d003728_P056 | Maize | cytosol, plasma membrane, vacuole | 31.28 | 21.32 |
Protein Annotations
| Gene3D:1.20.1530.20 | EntrezGene:102589621 | MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006812 | GO:GO:0006814 |
| GO:GO:0006885 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015297 |
| GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035725 | GO:GO:0055075 |
| GO:GO:0055085 | GO:GO:1902600 | InterPro:IPR038770 | UniProt:M1AQ05 | InterPro:Na+/solute_symporter_sf | InterPro:Na/H_exchanger_plant |
| InterPro:NaH_exchanger | PFAM:PF00999 | EnsemblPlantsGene:PGSC0003DMG400010663 | PGSC:PGSC0003DMG400010663 | EnsemblPlants:PGSC0003DMT400027658 | PRINTS:PR01084 |
| PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 | TIGRFAMs:TIGR00840 | TMHMM:TMhelix | UniParc:UPI000295060A | RefSeq:XP_006342736.1 |
| RefSeq:XP_015162161.1 | SEG:seg | : | : | : | : |
Description
Sodium/hydrogen exchanger [Source:PGSC_GENE;Acc:PGSC0003DMG400010663]
Coordinates
chr1:+:59438947..59444014
Molecular Weight (calculated)
59454.0 Da
IEP (calculated)
8.570
GRAVY (calculated)
0.524
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFDFGTLVA SLNRLSTSDH QSVVSINLFV ALICACIIIG HLLEENRWMN ESITALVIGL CTGVVILLIS GGKNSHILVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKSFFRNF STIMLFGAVG TLISFIIISF GATSIFKKWN IGNLEIGDYL AIGAIFSATD SVCTLQVLSQ DETPLLYSLV FGEGVVNDAT SVVLFNAVQN
201: FDLSHINTSK ALELVGNFLY LFASSTILGV ATGLLSAYII KKLYFGRHST DREVAIVILM AYLSYMLAEL FYLSAILTVF FSGIVMSHYT WHNVTESSRV
301: TTKHAFATLS FIAEIFIFLY VGMDALDMEK WRFVSDSPQL SLQVSSILLG LVLVGRAAFV FPLSFLSNLM KKSPEERISF NQQIIIWWAG LMRGAVSMAL
401: AYNQFTRGGH TQLRANAIMI TSTITVVLFS TGVFGLMTKP LIRLLQPSPK HLSRMISSEP TTPKSFIVPL LESTQDSEAD LGPNVPRPHS LRMLLSTPSH
501: TVHRYWRKFD NAFMRPVFGG RGFVPFVPGS PTEPSGH
101: VKKKSFFRNF STIMLFGAVG TLISFIIISF GATSIFKKWN IGNLEIGDYL AIGAIFSATD SVCTLQVLSQ DETPLLYSLV FGEGVVNDAT SVVLFNAVQN
201: FDLSHINTSK ALELVGNFLY LFASSTILGV ATGLLSAYII KKLYFGRHST DREVAIVILM AYLSYMLAEL FYLSAILTVF FSGIVMSHYT WHNVTESSRV
301: TTKHAFATLS FIAEIFIFLY VGMDALDMEK WRFVSDSPQL SLQVSSILLG LVLVGRAAFV FPLSFLSNLM KKSPEERISF NQQIIIWWAG LMRGAVSMAL
401: AYNQFTRGGH TQLRANAIMI TSTITVVLFS TGVFGLMTKP LIRLLQPSPK HLSRMISSEP TTPKSFIVPL LESTQDSEAD LGPNVPRPHS LRMLLSTPSH
501: TVHRYWRKFD NAFMRPVFGG RGFVPFVPGS PTEPSGH
001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP
Arabidopsis Description
NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.