Factsheet for GSMUA_Achr8P21980_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 3
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	88.56	88.4
GSMUA_Achr11P...	Banana	plasma membrane	86.72	87.52
Zm00001d022504_P001	Maize	plasma membrane	83.21	83.67
KXG36886	Sorghum	plasma membrane	82.47	83.4
Os07t0666900-01	Rice	vacuole	81.55	82.62
GSMUA_Achr8P06790_001	Banana	plasma membrane	81.73	82.34
GSMUA_Achr3P23840_001	Banana	plasma membrane	80.44	81.19
VIT_05s0020g01960.t01	Wine grape	plasma membrane	79.7	79.85
TraesCS2A01G121000.1	Wheat	plasma membrane	79.15	79.74
Solyc01g067710.2.1	Tomato	plasma membrane	78.97	79.7
PGSC0003DMT400027658	Potato	plasma membrane	78.97	79.7
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	78.23	78.81
KRH02192	Soybean	plasma membrane	77.12	77.99
HORVU2Hr1G021020.4	Barley	plasma membrane	80.81	77.39
VIT_07s0104g01280.t01	Wine grape	plasma membrane	70.85	76.95
GSMUA_Achr6P20250_001	Banana	plasma membrane	78.97	74.69
PGSC0003DMT400056555	Potato	plasma membrane	34.69	74.6
GSMUA_Achr2P01560_001	Banana	plasma membrane	73.99	74.54
Solyc06g008820.2.1	Tomato	plasma membrane	72.32	73.41
PGSC0003DMT400056556	Potato	golgi, plasma membrane	40.41	71.57
AT3G06370.3	Thale cress	plasma membrane	72.51	71.2
Bra020755.1-P	Field mustard	plasma membrane	69.37	69.63
CDY24699	Canola	plasma membrane	71.4	69.35
CDY05257	Canola	plasma membrane	71.59	69.29
KRH50930	Soybean	mitochondrion	77.12	66.35
TraesCS2B01G141900.1	Wheat	plasma membrane	72.14	65.38
GSMUA_Achr2P01860_001	Banana	plasma membrane	59.59	59.7
GSMUA_Achr5P04100_001	Banana	plasma membrane	56.64	59.04
GSMUA_Achr2P05520_001	Banana	plasma membrane	12.18	26.72
GSMUA_Achr10P...	Banana	peroxisome, plasma membrane, plastid	24.54	26.39

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0006814	GO:GO:0006885
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297	GO:GO:0015299
GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725	GO:GO:0055075	GO:GO:0055085
GO:GO:1902600	EnsemblPlantsGene:GSMUA_Achr8G21980_001	EnsemblPlants:GSMUA_Achr8P21980_001	EnsemblPlants:GSMUA_Achr8T21980_001	InterPro:IPR038770	UniProt:M0TSK1
InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084	PANTHER:PTHR10110
PANTHER:PTHR10110:SF117	TIGRFAMs:TIGR00840	TMHMM:TMhelix	UniParc:UPI00029494C7	SEG:seg	:

Description

Sodium/hydrogen exchanger 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G21980_001]

Coordinates

chr8:-:26705458..26715281

Molecular Weight (calculated)

60024.9 Da

IEP (calculated)

8.868

GRAVY (calculated)

0.559

Length

542 amino acids

Sequence
(BLAST)

001: MAFGLVAQQL VRLGILSTSD HASVVSINLF VALLCGCIVI GHLLEESRWI NESITALVIG VCTGVVILLT TKGKSSHIFV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FMTIMLFGAV GTLISFFIIS FGAIELFRKM DIGSLDIGDF LAIGAIFSAT DSVCTLQVLN QDETPLLYSL VFGEGVVNDA TSVVLFNAIQ
201: NFDLVHIDAI IILKFVGNFG YLFLSSTLLG AFGGLLSAYI IKKLYIGRHS TDREVALMIL MAYLSYMLAE LLNLSGILTV FFCGIVMSHY TWHNVTESSR
301: VTTKHAFATL SFIAETFLFL YVGMDALDIE KWRFVSDSPG KSLRVSSILL GLVLVGRAAF VFPLSFLSNL TKKSTDEKII FKQQVTIWWA GLMRGAVSIA
401: LAYNQFTRSG HTQLRGNAFL ITSTITVVLF STVVFGLMTK PLIRFLLPHN AKHLSSMSSE PSTPKSLLSP FLENGQGSEV EVGGEFASRP SSLRMLLSKP
501: THTVHYYWRK FDNAFMRPMF GGRGFVPFFP GSPTEQSAHN WQ

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.