CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022504_P001	Maize	plasma membrane	96.64	96.1
Os07t0666900-01	Rice	vacuole	91.42	91.59
TraesCS2A01G121000.1	Wheat	plasma membrane	88.43	88.1
TraesCS2D01G123000.1	Wheat	plasma membrane, vacuole	87.5	87.17
HORVU2Hr1G021020.4	Barley	plasma membrane	89.18	84.45
GSMUA_Achr8P21980_001	Banana	plasma membrane	83.4	82.47
GSMUA_Achr11P...	Banana	plasma membrane	81.34	81.19
GSMUA_Achr10P...	Banana	plasma membrane	78.54	77.53
VIT_05s0020g01960.t01	Wine grape	plasma membrane	77.8	77.08
Solyc01g067710.2.1	Tomato	plasma membrane	76.12	75.98
PGSC0003DMT400027658	Potato	plasma membrane	75.93	75.79
KRH02192	Soybean	plasma membrane	75.56	75.56
VIT_07s0104g01280.t01	Wine grape	plasma membrane	68.1	73.15
EES10186	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	73.51	72.83
PGSC0003DMT400056555	Potato	plasma membrane	33.21	70.63
Solyc06g008820.2.1	Tomato	plasma membrane	69.59	69.85
KXG21297	Sorghum	plasma membrane	70.9	69.6
TraesCS2B01G141900.1	Wheat	plasma membrane	77.61	69.57
AT3G06370.3	Thale cress	plasma membrane	70.52	68.48
Bra020755.1-P	Field mustard	plasma membrane	68.66	68.15
CDY24699	Canola	plasma membrane	70.71	67.92
CDY05257	Canola	plasma membrane	70.9	67.86
PGSC0003DMT400056556	Potato	golgi, plasma membrane	38.62	67.65
KRH50930	Soybean	mitochondrion	75.75	64.44
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	58.77	59.43
KXG35307	Sorghum	plastid	26.87	26.87
KXG35876	Sorghum	plasma membrane	25.93	25.74

Protein Annotations

Gene3D:1.20.1530.20	MapMan:24.2.8.1.1	EntrezGene:8074408	UniProt:A0A1B6QG35	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812
GO:GO:0006814	GO:GO:0006885	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651
GO:GO:0015297	GO:GO:0015299	GO:GO:0015385	GO:GO:0016020	GO:GO:0016021	GO:GO:0035725
GO:GO:0055075	GO:GO:0055085	GO:GO:1902600	InterPro:IPR038770	EnsemblPlants:KXG36886	ProteinID:KXG36886
ProteinID:KXG36886.1	InterPro:Na+/solute_symporter_sf	InterPro:Na/H_exchanger_plant	InterPro:NaH_exchanger	PFAM:PF00999	PRINTS:PR01084
PANTHER:PTHR10110	PANTHER:PTHR10110:SF117	EnsemblPlantsGene:SORBI_3002G408100	unigene:Sbi.20681	TIGRFAMs:TIGR00840	TMHMM:TMhelix
UniParc:UPI0003C64BBF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:75701739..75706882

Molecular Weight (calculated)

58872.6 Da

IEP (calculated)

7.944

GRAVY (calculated)

0.597

Length

536 amino acids

Sequence
(BLAST)

001: MGLGVVAELV RLGVLSSTSD HSSVVSINLF VALLCACIVL GHLLEENRWV NESITALIIG LCTGVVILLT TKGKSSHILV FSEDFFFIYL LPPIIFNAGF
101: QVKKKQFFRN FMTITLFGAV GTMISFFTIS LGAIAIFSRM NIGTLDVGDF LAIGAIFSAT DSVCTLQVLH QDETPLLYSL VFGEGVVNDA TSVVLFNALQ
201: NFDLNHIDVT VVLNFLGNFC YLFLSSTLLG VFSGLLSAYI IKKLYIGRHS TDREVALMML MAYLSYMLAE LLDLSGILTV FFCGIVMSHY TWHNVTESSR
301: VTTKHAFATL SFIAETFLFL YVGMDALDIE KWEFASDIPG KSIGISSILL GLVLVGRAAF VFPLSFLSNL TKKSPLEKIT LRQQVVIWWA GLMRGAVSIA
401: LAYNKFTRSG HTQLHGNAIM ITSTITVVLF STMVFGMMTK PLIHLLLPAS SNTAHSEPSS PKSLHSPLLT SMQGSDLEVP SAQIVRPSSL RMLLSKPTHT
501: VHYYWRKFDD ALMRPMFGGR GFVPFSPGSP TDHAGR

Best Arabidopsis Sequence Match ( AT3G05030.1 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVFGMLTKPL IRYLMPHQKA TTSTTSMLSD DSTPKSIHIP LLDGEQLDSF ELPGSHQDVP RPNSLRGFLM
501: RPTRTVHYYW RQFDDAFMRP VFGGRGFVPF VPGSPTERSS HDLSKP

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.