Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- vacuole 3
- extracellular 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020755.1-P | Field mustard | plasma membrane | 86.23 | 88.15 |
| CDY24699 | Canola | plasma membrane | 88.59 | 87.63 |
| CDY05257 | Canola | plasma membrane | 88.77 | 87.5 |
| VIT_05s0020g01960.t01 | Wine grape | plasma membrane | 71.56 | 73.01 |
| GSMUA_Achr11P... | Banana | plasma membrane | 70.83 | 72.81 |
| KRH02192 | Soybean | plasma membrane | 70.65 | 72.76 |
| GSMUA_Achr8P21980_001 | Banana | plasma membrane | 71.2 | 72.51 |
| PGSC0003DMT400027658 | Potato | plasma membrane | 69.93 | 71.88 |
| Solyc01g067710.2.1 | Tomato | plasma membrane | 69.93 | 71.88 |
| GSMUA_Achr3P23840_001 | Banana | plasma membrane | 69.02 | 70.95 |
| Zm00001d022504_P001 | Maize | plasma membrane | 69.2 | 70.87 |
| GSMUA_Achr8P06790_001 | Banana | plasma membrane | 68.84 | 70.63 |
| KXG36886 | Sorghum | plasma membrane | 68.48 | 70.52 |
| Os07t0666900-01 | Rice | vacuole | 68.12 | 70.28 |
| AT5G27150.1 | Thale cress | plasma membrane | 68.3 | 70.07 |
| AT3G05030.4 | Thale cress | plasma membrane | 69.02 | 69.78 |
| TraesCS2A01G121000.1 | Wheat | plasma membrane | 67.39 | 69.14 |
| GSMUA_Achr10P... | Banana | plasma membrane | 67.39 | 68.51 |
| TraesCS2D01G123000.1 | Wheat | plasma membrane, vacuole | 66.49 | 68.22 |
| Os11t0648000-01 | Rice | plasma membrane | 65.58 | 66.42 |
| HORVU2Hr1G021020.4 | Barley | plasma membrane | 67.93 | 66.25 |
| TraesCS4A01G145300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 64.67 | 66.11 |
| TraesCS4D01G147600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 64.49 | 65.8 |
| GSMUA_Achr2P01560_001 | Banana | plasma membrane | 64.13 | 65.8 |
| EES10186 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 63.95 | 65.25 |
| Zm00001d048732_P005 | Maize | plasma membrane | 64.31 | 65.02 |
| GSMUA_Achr6P20250_001 | Banana | plasma membrane | 67.39 | 64.92 |
| KXG21297 | Sorghum | plasma membrane | 64.13 | 64.84 |
| TraesCS4B01G125700.1 | Wheat | golgi, plasma membrane, vacuole | 59.96 | 64.65 |
| Os05t0148600-01 | Rice | plasma membrane | 63.04 | 63.97 |
| TraesCS1A01G102300.1 | Wheat | plasma membrane | 63.04 | 63.74 |
| TraesCS1D01G093900.1 | Wheat | plasma membrane | 63.04 | 63.74 |
| TraesCS1B01G112700.1 | Wheat | plasma membrane | 62.86 | 63.55 |
| Zm00001d024832_P002 | Maize | plasma membrane | 64.13 | 63.33 |
| HORVU1Hr1G020360.2 | Barley | plasma membrane | 62.14 | 62.82 |
| KRH50930 | Soybean | mitochondrion | 70.65 | 61.9 |
| TraesCS2B01G141900.1 | Wheat | plasma membrane | 63.04 | 58.19 |
| AT5G55470.1 | Thale cress | plasma membrane | 54.35 | 56.71 |
| HORVU4Hr1G033760.1 | Barley | mitochondrion, plastid | 64.13 | 54.88 |
| Zm00001d028330_P048 | Maize | plasma membrane | 45.65 | 46.67 |
| Zm00001d048459_P007 | Maize | plasma membrane | 27.36 | 31.52 |
| Zm00001d026118_P021 | Maize | nucleus, peroxisome, plasma membrane | 38.95 | 30.54 |
| AT1G54370.1 | Thale cress | plasma membrane | 26.09 | 27.64 |
| Zm00001d025052_P007 | Maize | plasma membrane | 24.28 | 25.77 |
| AT1G79610.1 | Thale cress | plasma membrane | 24.64 | 25.42 |
| Zm00001d021844_P003 | Maize | mitochondrion | 41.67 | 24.49 |
| Zm00001d003728_P056 | Maize | cytosol, plasma membrane, vacuole | 28.99 | 20.3 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | EntrezGene:819811 | UniProt:A0A178VAM2 | UniProt:A0A1I9LS48 | ProteinID:ANM65406.1 |
| ProteinID:ANM65408.1 | ArrayExpress:AT3G06370 | EnsemblPlantsGene:AT3G06370 | RefSeq:AT3G06370 | TAIR:AT3G06370 | RefSeq:AT3G06370-TAIR-G |
| EnsemblPlants:AT3G06370.3 | Unigene:At.40533 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035725 | GO:GO:0055075 | GO:GO:0055085 | GO:GO:1902600 |
| InterPro:IPR038770 | Symbol:NHX4 | RefSeq:NP_001327377.1 | RefSeq:NP_001327379.1 | InterPro:Na+/solute_symporter_sf | InterPro:Na/H_exchanger_plant |
| InterPro:NaH_exchanger | ProteinID:OAP02002.1 | PFAM:PF00999 | PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 |
| TMHMM:TMhelix | UniParc:UPI00000A4D8C | SEG:seg | : | : | : |
Description
NHX4NHX4 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS48]
Coordinates
chr3:-:1929946..1934073
Molecular Weight (calculated)
61139.0 Da
IEP (calculated)
7.242
GRAVY (calculated)
0.463
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIGLSTMLE KTEALFASDH ASVVSMNLFV ALLCACIVLG HLLEETRWMN ESITALIIGS CTGIVILLIS GGKSSRILVF SEDLFFIYLL PPIIFNAGFQ
101: VKKKQFFRNF MTIMLFGAIG TLISFVIISF GAKHLFEKMN IGDLTIADYL AIGAIFSATD SVCTLQVLNQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQR
201: FDLTNINSAI ALEFAGNFFY LFILSTALGV AAGLLSAFVI KKLYIGRHST DREVALMMLL AYLSYMLAEL FHLSSILTVF FCGIVMSHYT WHNVTDKSKV
301: TTKHTFAAMS FLAEIFIFLY VGMDALDIEK WDVVRNSPGQ SIGVSSILLG LILLGRAAFV FPLSFLSNLT KSSPDEKIDL KKQVTIWWAG LMRGAVSMAL
401: AYNQFTTSGH TKVLGNAIMI TSTITVVLFS TVVFGLLTKP LVKHLQPSSK QSSTTALQIT LRSSFHDPIL HEPLLSTQGQ SEYDPEQHVS FRMFWKSPSR
501: AIHHYWRKFD NAVMRRIFGG RGVSPVVPGS PIENSVPQWS EEVENKEQNG EP
101: VKKKQFFRNF MTIMLFGAIG TLISFVIISF GAKHLFEKMN IGDLTIADYL AIGAIFSATD SVCTLQVLNQ DETPLLYSLV FGEGVVNDAT SVVLFNAIQR
201: FDLTNINSAI ALEFAGNFFY LFILSTALGV AAGLLSAFVI KKLYIGRHST DREVALMMLL AYLSYMLAEL FHLSSILTVF FCGIVMSHYT WHNVTDKSKV
301: TTKHTFAAMS FLAEIFIFLY VGMDALDIEK WDVVRNSPGQ SIGVSSILLG LILLGRAAFV FPLSFLSNLT KSSPDEKIDL KKQVTIWWAG LMRGAVSMAL
401: AYNQFTTSGH TKVLGNAIMI TSTITVVLFS TVVFGLLTKP LVKHLQPSSK QSSTTALQIT LRSSFHDPIL HEPLLSTQGQ SEYDPEQHVS FRMFWKSPSR
501: AIHHYWRKFD NAVMRRIFGG RGVSPVVPGS PIENSVPQWS EEVENKEQNG EP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.