Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G260700.1 | Wheat | plasma membrane | 99.04 | 97.18 |
| TraesCS5D01G268200.1 | Wheat | plasma membrane | 98.66 | 96.8 |
| KXG35876 | Sorghum | plasma membrane | 85.63 | 82.78 |
| HORVU5Hr1G072440.26 | Barley | golgi, mitochondrion, nucleus, plastid | 86.02 | 82.69 |
| TraesCS7B01G149100.1 | Wheat | plasma membrane | 77.97 | 75.79 |
| TraesCS5B01G173800.1 | Wheat | plasma membrane | 72.03 | 70.41 |
| KRH11690 | Soybean | plasma membrane | 71.07 | 69.48 |
| KRH36691 | Soybean | plasma membrane | 71.07 | 69.48 |
| KRH51250 | Soybean | plasma membrane | 70.11 | 69.45 |
| AT1G79610.1 | Thale cress | plasma membrane | 71.07 | 69.35 |
| GSMUA_Achr10P... | Banana | peroxisome, plasma membrane, plastid | 66.86 | 69.25 |
| Solyc04g056600.2.1 | Tomato | plasma membrane | 70.31 | 69.11 |
| AT1G54370.1 | Thale cress | plasma membrane | 66.86 | 66.99 |
| Bra035130.1-P | Field mustard | cytosol, golgi, plasma membrane | 65.13 | 66.54 |
| Os09t0482620-00 | Rice | golgi, mitochondrion, peroxisome | 32.57 | 64.64 |
| VIT_15s0024g00260.t01 | Wine grape | plasma membrane | 29.89 | 64.46 |
| VIT_15s0024g00280.t01 | Wine grape | golgi, plasma membrane | 38.89 | 64.44 |
| CDX79331 | Canola | plasma membrane | 68.39 | 64.09 |
| CDX67985 | Canola | plasma membrane | 68.2 | 63.91 |
| CDX88553 | Canola | plasma membrane | 68.77 | 61.58 |
| Zm00001d020892_P003 | Maize | plasma membrane | 54.6 | 57.46 |
| CDX87370 | Canola | plasma membrane | 69.92 | 56.68 |
| TraesCS7B01G191300.1 | Wheat | plasma membrane | 27.78 | 27.51 |
| TraesCS4B01G125700.1 | Wheat | golgi, plasma membrane, vacuole | 25.48 | 25.98 |
| TraesCS1B01G112700.1 | Wheat | plasma membrane | 26.63 | 25.46 |
| TraesCS2B01G141900.1 | Wheat | plasma membrane | 25.86 | 22.58 |
Protein Annotations
| MapMan:24.2.8.1.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006814 | GO:GO:0006885 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR003323 | InterPro:NaH_exchanger |
| InterPro:OTU_dom | PFAM:PF00999 | PRINTS:PR01084 | PFscan:PS50802 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF111 |
| TIGRFAMs:TIGR00840 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G259100 | EnsemblPlants:TraesCS5B01G259100.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:441532952..441539514
Molecular Weight (calculated)
57657.8 Da
IEP (calculated)
4.907
GRAVY (calculated)
0.443
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAGAGAYYA AAPHQGAMPG FGGAVDEQQA AGVGILLQIS MLVLSFVLGH LLRRRKFYYL PEASASLLIG MIVGGFANIS NTQKSTRRWF NFREDFFLLF
101: LLPPIIFQSG FNLAPKPFFS NFGAIITFAI LGTFIASIVT GLLVYLAGLI FIIYRLPLVE CMMFGALVSA TDPVTVLSIF QELGTDVNLY ALVFGESVLN
201: DAVAISLYRT MASMRTSSSG QNIFLVILRF LENFVGSMSS GVGVGLISAL LFKYAELGVE NLHNLESCLF VLFPYFSYML AEGLGLSGIV SILFTGIVMK
301: RYTFYNLSED SQRFTARFFH LLSSLAEAFI FIYMGFDIAM ERQSWSHIGF IFFSIVFILV ARAANVFSCA YILNLARPPH SQIPREYQLA LWYSGLRGAM
401: AFALALQSVH DLPDGHGETI FTATTSIVVL TVLLIGGSTG TMLEALQVVG DSNCYRHPYE ENFEGSSEEG TPSKSKFQLK LRDLRRSTSS FALLDRNYLT
501: PIFTSQHEDD DDDDDNDDDS FA
101: LLPPIIFQSG FNLAPKPFFS NFGAIITFAI LGTFIASIVT GLLVYLAGLI FIIYRLPLVE CMMFGALVSA TDPVTVLSIF QELGTDVNLY ALVFGESVLN
201: DAVAISLYRT MASMRTSSSG QNIFLVILRF LENFVGSMSS GVGVGLISAL LFKYAELGVE NLHNLESCLF VLFPYFSYML AEGLGLSGIV SILFTGIVMK
301: RYTFYNLSED SQRFTARFFH LLSSLAEAFI FIYMGFDIAM ERQSWSHIGF IFFSIVFILV ARAANVFSCA YILNLARPPH SQIPREYQLA LWYSGLRGAM
401: AFALALQSVH DLPDGHGETI FTATTSIVVL TVLLIGGSTG TMLEALQVVG DSNCYRHPYE ENFEGSSEEG TPSKSKFQLK LRDLRRSTSS FALLDRNYLT
501: PIFTSQHEDD DDDDDNDDDS FA
001: MSSELQISPA IHDPQGQEKQ QQAAGVGILL QIMMLVLSFV LGHVLRRHKF YYLPEASASL LIGLIVGGLA NISNTETSIR TWFNFHDEFF FLFLLPPIIF
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
101: QSGFSLQPKP FFSNFGAIVT FSVLGTFVAS MVTGLLVYLG GVMFLMYRLP FVECLMFGSL ISATDPVTVL SIFQELGSDV NLYALVFGES VLNDAMAISL
201: YRTMSLVRSH SSGQNFFMVI VRFLETFVGS MSAGVGVGFT SALLFKYAGL DVDNLQNLEC CLFVLFPYFS YMLAEGLSLS GIVSILFTGI VMKHYTYSNL
301: SANSQRFVSA FFHLISSLAE TFVFIYMGFD IAMEKHSWSH LGFIFFSILF IVIARAANVF GCGYLVNLAR PAHRKIPMTH QKALWYSGLR GAMAFALALQ
401: SVHDLPEGHG QTIFTATTAI VVLTVLLIGG STGTMLEALE VVGDSHDTSL GDGFEVVNSR YMTSYDDEDT PPGSGFRTKL REFHKSAASF TELDRNYLTP
501: FFTSNNGDYD DEGNMEQHHE ERIPFTRRGN LNNRG
Arabidopsis Description
NHX6Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.