Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19707 | Canola | plasma membrane | 97.61 | 99.81 |
| CDY00002 | Canola | plasma membrane | 97.24 | 98.69 |
| Bra020599.1-P | Field mustard | plasma membrane | 91.53 | 96.88 |
| AT5G27150.1 | Thale cress | plasma membrane | 92.08 | 92.94 |
| Bra039469.1-P | Field mustard | plasma membrane | 86.56 | 86.08 |
| VIT_14s0030g00710.t01 | Wine grape | plasma membrane | 76.98 | 77.55 |
| KRH34011 | Soybean | plasma membrane | 76.43 | 76.01 |
| KRG92790 | Soybean | plasma membrane | 76.24 | 75.82 |
| PGSC0003DMT400057913 | Potato | plasma membrane | 74.59 | 75.56 |
| Solyc01g098190.2.1 | Tomato | plasma membrane | 74.22 | 75.19 |
| KRH68649 | Soybean | plasma membrane | 74.77 | 74.22 |
| KRG96912 | Soybean | plasma membrane | 73.66 | 73.13 |
| Bra009975.1-P | Field mustard | golgi, plasma membrane, plastid | 19.34 | 69.08 |
| Bra020755.1-P | Field mustard | plasma membrane | 66.67 | 67.04 |
| Bra009647.1-P | Field mustard | cytosol | 7.55 | 57.75 |
| Bra002905.1-P | Field mustard | plasma membrane | 56.54 | 57.6 |
| Zm00001d041859_P001 | Maize | mitochondrion | 12.52 | 44.74 |
| Bra035130.1-P | Field mustard | cytosol, golgi, plasma membrane | 23.94 | 25.44 |
Protein Annotations
| Gene3D:1.20.1530.20 | MapMan:24.2.8.1.1 | EnsemblPlantsGene:Bra036110 | EnsemblPlants:Bra036110.1 | EnsemblPlants:Bra036110.1-P | InterPro:Cation/H_exchanger |
| InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0006814 | GO:GO:0006885 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035725 |
| GO:GO:0055075 | GO:GO:0055085 | GO:GO:1902600 | InterPro:IPR038770 | UniProt:M4F4V6 | InterPro:Na+/solute_symporter_sf |
| InterPro:Na/H_exchanger_plant | InterPro:NaH_exchanger | PFAM:PF00999 | PRINTS:PR01084 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF117 |
| TMHMM:TMhelix | UniParc:UPI0002541F4A | SEG:seg | : | : | : |
Description
AT5G27150 (E=4e-271) NHX1, ATNHX, AT-NHX1, ATNHX1 | NHX1 (NA+/H+ EXCHANGER); protein binding / sodium ion transmembrane transporter/ sodium:hydrogen antiporter
Coordinates
chrA09:+:2662522..2665586
Molecular Weight (calculated)
60196.9 Da
IEP (calculated)
7.897
GRAVY (calculated)
0.498
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASLLDTLV SKMPSLSASD HASVVSLNLF VALLCACIVL GHLLEENRWM NESITALLIG LATGVVILLI SNGKSSHLLV FSEDLFFIYL LPPIIFNAGF
101: QVKKKQFFRN FVTIMLFGAI GTVVSCTVIT LGVTQFFKKL DIGTFDLGDY LAIGAIFAAT DSVCTLQVLN QDETPLLYSL VFGEGVVNDA TSVVVFNAIQ
201: SFDLTHLNHE AAFRLLGNFF YLFLLSTLLG VATGLISAYI IKKLYFGRHS TDREVALMML MAYLSYMLAE LFDLSGILTV FFCGIVMSHY TWHNVTESSR
301: ITTKHAFATL SFLAETFIFL YVGMDALDID KWRSVSDSPG TSVAVSSILI GLLMLGRAAF VFPLSFLSNL AKKNQSERID FKMQVVIWWS GLMRGAVSMA
401: LAYNKFTRAG KTDLRGNAIM ITSTITVCLF STVVFGMLTK PLIRFLLPHQ KATTSFLSDG NTPKSIQIPL IDQDSFIEFA GNHNVPRPDS IRGFLTRPTR
501: TVHYYWRQFD DSFMRPVFGG RGFVPFVPGS PTERDPPTDL SRA
101: QVKKKQFFRN FVTIMLFGAI GTVVSCTVIT LGVTQFFKKL DIGTFDLGDY LAIGAIFAAT DSVCTLQVLN QDETPLLYSL VFGEGVVNDA TSVVVFNAIQ
201: SFDLTHLNHE AAFRLLGNFF YLFLLSTLLG VATGLISAYI IKKLYFGRHS TDREVALMML MAYLSYMLAE LFDLSGILTV FFCGIVMSHY TWHNVTESSR
301: ITTKHAFATL SFLAETFIFL YVGMDALDID KWRSVSDSPG TSVAVSSILI GLLMLGRAAF VFPLSFLSNL AKKNQSERID FKMQVVIWWS GLMRGAVSMA
401: LAYNKFTRAG KTDLRGNAIM ITSTITVCLF STVVFGMLTK PLIRFLLPHQ KATTSFLSDG NTPKSIQIPL IDQDSFIEFA GNHNVPRPDS IRGFLTRPTR
501: TVHYYWRQFD DSFMRPVFGG RGFVPFVPGS PTERDPPTDL SRA
001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA
Arabidopsis Description
NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.