Factsheet for Bra009647.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45655	Canola	plasma membrane	83.1	11.15
Bra002905.1-P	Field mustard	plasma membrane	81.69	10.88
AT5G55470.1	Thale cress	plasma membrane	77.46	10.4
Solyc10g006080.1.1	Tomato	plasma membrane	70.42	9.52
GSMUA_Achr5P04100_001	Banana	plasma membrane	67.61	9.23
VIT_19s0090g01480.t01	Wine grape	plasma membrane	66.2	9.02
PGSC0003DMT400085382	Potato	plasma membrane	69.01	8.94
KRH46278	Soybean	plasma membrane	64.79	8.7
Bra020599.1-P	Field mustard	plasma membrane	56.34	7.8
HORVU7Hr1G046030.1	Barley	plasma membrane	57.75	7.78
TraesCS7D01G226200.1	Wheat	plasma membrane	57.75	7.78
TraesCS7B01G191300.1	Wheat	plasma membrane	57.75	7.78
TraesCS7A01G228400.1	Wheat	plasma membrane	57.75	7.78
Os06t0318500-00	Rice	plasma membrane	57.75	7.58
Bra036110.1-P	Field mustard	plasma membrane	57.75	7.55
Bra039469.1-P	Field mustard	plasma membrane	57.75	7.51
KXG19894	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	54.93	7.36
Zm00001d045883_P001	Maize	plasma membrane	56.34	7.34
Bra020755.1-P	Field mustard	plasma membrane	54.93	7.22
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	26.76	3.72
Bra009975.1-P	Field mustard	golgi, plasma membrane, plastid	0.0	0.0

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra009647	EnsemblPlants:Bra009647.1	EnsemblPlants:Bra009647.1-P	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006950	GO:GO:0008150
GO:GO:0009628	GO:GO:0009651	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021	GO:GO:0055075
GO:GO:1902600	UniProt:M4CZK0	InterPro:NHX4	PANTHER:PTHR10110	PANTHER:PTHR10110:SF101	UniParc:UPI000253F017

Description

AT5G55470 (E=8e-025) ATNHX3, NHX3 | ATNHX3; sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA06:+:16370146..16370361

Molecular Weight (calculated)

7915.7 Da

IEP (calculated)

5.378

GRAVY (calculated)

0.759

Length

71 amino acids

Sequence
(BLAST)

1: MLTLHILHQD ETPLLYSLVL GEGVVNDATS VVHFNVVQKI HVESIYGLTA LRVFENFLYL FSTSTILGIA I

Best Arabidopsis Sequence Match ( AT5G55470.1 )
(BLAST)

001: MSIGLTEFVT NKLAAEHPQV IPISVFIAIL CLCLVIGHLL EENRWVNESI TAILVGAASG TVILLISKGK SSHILVFDEE LFFIYLLPPI IFNAGFQVKK
101: KKFFHNFLTI MSFGVIGVFI STVIISFGTW WLFPKLGFKG LSARDYLAIG TIFSSTDTVC TLQILHQDET PLLYSLVFGE GVVNDATSVV LFNAVQKIQF
201: ESLTGWTALQ VFGNFLYLFS TSTLLGIGVG LITSFVLKTL YFGRHSTTRE LAIMVLMAYL SYMLAELFSL SGILTVFFCG VLMSHYASYN VTESSRITSR
301: HVFAMLSFIA ETFIFLYVGT DALDFTKWKT SSLSFGGTLG VSGVITALVL LGRAAFVFPL SVLTNFMNRH TERNESITFK HQVIIWWAGL MRGAVSIALA
401: FKQFTYSGVT LDPVNAAMVT NTTIVVLFTT LVFGFLTKPL VNYLLPQDAS HNTGNRGKRT EPGSPKEDAT LPLLSFDESA STNFNRAKDS ISLLMEQPVY
501: TIHRYWRKFD DTYMRPIFGG PRRENQPEC

Arabidopsis Description

NHX4Sodium/hydrogen exchanger 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S397]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.