Factsheet for Bra009975.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29237	Canola	endoplasmic reticulum, plasma membrane, plastid	61.84	100.0
CDX86176	Canola	golgi, plasma membrane, plastid	99.34	99.34
KRH12862	Soybean	golgi, plasma membrane, vacuole	19.74	25.64
Bra020599.1-P	Field mustard	plasma membrane	69.74	20.66
Bra036110.1-P	Field mustard	plasma membrane	69.08	19.34
Bra039469.1-P	Field mustard	plasma membrane	63.82	17.77
Bra020755.1-P	Field mustard	plasma membrane	50.0	14.07
Bra002905.1-P	Field mustard	plasma membrane	42.76	12.2
Bra035130.1-P	Field mustard	cytosol, golgi, plasma membrane	21.05	6.26
Zm00001d041859_P001	Maize	mitochondrion	4.61	4.61
Bra009647.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra009975	EnsemblPlants:Bra009975.1	EnsemblPlants:Bra009975.1-P	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021
GO:GO:0055075	GO:GO:1902600	UniProt:M4D0H7	InterPro:Na/H_exchanger_plant	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117
TMHMM:TMhelix	UniParc:UPI000253F519	SEG:seg	:	:	:

Description

AT5G27150 (E=2e-032) NHX1, ATNHX, AT-NHX1, ATNHX1 | NHX1 (NA+/H+ EXCHANGER); protein binding / sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA06:-:18414384..18415070

Molecular Weight (calculated)

17113.1 Da

IEP (calculated)

10.318

GRAVY (calculated)

0.297

Length

152 amino acids

Sequence
(BLAST)

001: MSKVFQLFSP PFVQKHFVHR HDVTCNIGMM SLAAIQLEWH TFGTLSFLAD TFIFLYVGMD ALDIDKWRIV RDSLGTSFAV SSILIALLML GRAAFVFPLS
101: FLPNLAKKNQ SEKINFKMQL YSFMRPVFGG RGFGPFVSSS PTERDPPGLR GV

Best Arabidopsis Sequence Match ( AT5G27150.1 )
(BLAST)

001: MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK
101: KQFFRNFVTI MLFGAVGTII SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE GVVNDATSVV VFNAIQSFDL
201: THLNHEAAFH LLGNFLYLFL LSTLLGAATG LISAYVIKKL YFGRHSTDRE VALMMLMAYL SYMLAELFDL SGILTVFFCG IVMSHYTWHN VTESSRITTK
301: HTFATLSFLA ETFIFLYVGM DALDIDKWRS VSDTPGTSIA VSSILMGLVM VGRAAFVFPL SFLSNLAKKN QSEKINFNMQ VVIWWSGLMR GAVSMALAYN
401: KFTRAGHTDV RGNAIMITST ITVCLFSTVV FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF LTRPTRTVHY
501: YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA

Arabidopsis Description

NHX1Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:Q0WVZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.