CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009975.1-P	Field mustard	golgi, plasma membrane, plastid	25.64	19.74
CDX86176	Canola	golgi, plasma membrane, plastid	25.64	19.74
KRH02192	Soybean	plasma membrane	77.78	16.98
CDY29237	Canola	endoplasmic reticulum, plasma membrane, plastid	11.97	14.89
KRG92790	Soybean	plasma membrane	69.23	14.84
KRH34011	Soybean	plasma membrane	69.23	14.84
KRH50930	Soybean	mitochondrion	77.78	14.44
KRG96912	Soybean	plasma membrane	67.52	14.44
KRH68649	Soybean	plasma membrane	66.67	14.26
KRH46278	Soybean	plasma membrane	60.68	13.42
KRH11690	Soybean	plasma membrane	29.91	6.55
KRH36691	Soybean	plasma membrane	29.91	6.55
KRH51250	Soybean	plasma membrane	29.06	6.45
Zm00001d041859_P001	Maize	mitochondrion	2.56	1.97

Protein Annotations

MapMan:35.1	UniProt:A0A0R0G3I0	EMBL:ACUP02009419	InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	EnsemblPlantsGene:GLYMA_15G200200
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006812	GO:GO:0006814
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0015297	GO:GO:0015299
GO:GO:0016020	GO:GO:0016021	GO:GO:0055075	GO:GO:0055085	GO:GO:1902600	EnsemblPlants:KRH12862
ProteinID:KRH12862	ProteinID:KRH12862.1	InterPro:Na/H_exchanger_plant	PFAM:PF00999	PANTHER:PTHR10110	PANTHER:PTHR10110:SF117
TMHMM:TMhelix	UniParc:UPI0006EDAC46	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:24343773..24347816

Molecular Weight (calculated)

13436.4 Da

IEP (calculated)

5.815

GRAVY (calculated)

0.480

Length

117 amino acids

Sequence
(BLAST)

001: MLPVPIRHST DHEVALIVHM AYLSYILYEL FSLGAILTVF FCDIVMSHCT WHNVIESSRV TTKHVFATLS FIVEIFIFLY VGMDALDIEK WQIVSQSIGE
101: WTRGRCGYQH AASPLEE

Best Arabidopsis Sequence Match ( AT3G05030.3 )
(BLAST)

001: MTMFASLTSK MLSVSTSDHA SVVSLNLFVA LLCACIVIGH LLEENRWMNE SITALLIGLG TGVVILLISR GKNSHLLVFS EDLFFIYLLP PIIFNAGFQV
101: KKKQFFRNFV TIMAFGAIGT VVSCTIISLG AIQFFKKLDI GTFDLGDFLA IGAIFAATDS VCTLQVLNQD ETPLLYSLVF GEGVVNDATS VVLFNAIQSF
201: DLTHLNHEAA FQFLGNFFYL FLLSTGLGVA TGLISAYVIK KLYFGRHSTD REVALMMLMA YLSYMLAELF ALSGILTVFF CGIVMSHYTW HNVTESSRIT
301: TKHAFATLSF LAETFIFLYV GMDALDIEKW RFVSDSPGTS VAVSSILMGL VMLGRAAFVF PLSFLSNLAK KHQSEKISIK QQVVIWWAGL MRGAVSMALA
401: YNKFTRSGHT ELRGNAIMIT STITVCLFST MVRYLPLRFG LLNVFSLQRC CQ

Arabidopsis Description

NHX2Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.