Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P10290_001 | Banana | cytosol | 61.34 | 40.27 |
| Solyc05g005470.2.1 | Tomato | cytosol | 48.71 | 35.0 |
| GSMUA_Achr6P02410_001 | Banana | cytosol | 39.95 | 23.81 |
| GSMUA_Achr9P11600_001 | Banana | cytosol | 20.88 | 20.25 |
| GSMUA_Achr2P15060_001 | Banana | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400079607 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P15050_001 | EnsemblPlants:GSMUA_Achr2T15050_001 | EnsemblPlantsGene:GSMUA_Achr2G15050_001 | Gene3D:3.40.30.10 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_fold |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF85 | PFAM:PF13905 | PFscan:PS51352 |
| SEG:seg | SUPFAM:SSF52833 | UniParc:UPI000296F166 | UniProt:M0S846 | MapMan:10.6.3 | : |
Description
Putative Probable nucleoredoxin 1-2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15050_001]
Coordinates
chr2:+:16540724..16542462
Molecular Weight (calculated)
43510.0 Da
IEP (calculated)
4.685
GRAVY (calculated)
-0.154
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKVAVSDV VSLLSGDKRD FLLRNNGDKV AISSLDGKVV GLYFSASWCR PRRRFTPLLI EVYDELSSKG QCQFEIVIVP ADHDEDSFDR YFSKMPWLAI
101: PFADSNTRKK LDMLFRVGGI PHLVILDASG KVLNEQGIEA VREYGAEGYP FTPEKINRLR EEEEEAAKKE QTLPRLLVSP SRDYLISNDG SKVAVSDLEG
201: KIVVLYFSIS AFTCCAEFTP VLAQIYRKLK EARESFEVVL VSLDDEKSSY EQDLASMPWL AIPFEDKSRQ KLGRCFDVRA NPALVVIGAD GKTMDVNYAE
301: LVEEHGFDAW EAFPFSQERL DLTAEKAKAK MNAQTLESLL VSGDLDYVIG KQGSKVPVKE LVGATILLYF SACWCDRYRE FAAGLIEE
101: PFADSNTRKK LDMLFRVGGI PHLVILDASG KVLNEQGIEA VREYGAEGYP FTPEKINRLR EEEEEAAKKE QTLPRLLVSP SRDYLISNDG SKVAVSDLEG
201: KIVVLYFSIS AFTCCAEFTP VLAQIYRKLK EARESFEVVL VSLDDEKSSY EQDLASMPWL AIPFEDKSRQ KLGRCFDVRA NPALVVIGAD GKTMDVNYAE
301: LVEEHGFDAW EAFPFSQERL DLTAEKAKAK MNAQTLESLL VSGDLDYVIG KQGSKVPVKE LVGATILLYF SACWCDRYRE FAAGLIEE
001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
Arabidopsis Description
Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.