Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P15060_001 | Banana | nucleus | 12.44 | 62.31 |
| GSMUA_Achr3P10290_001 | Banana | cytosol | 38.86 | 42.81 |
| GSMUA_Achr2P15050_001 | Banana | cytosol | 23.81 | 39.95 |
| GSMUA_Achr9P11600_001 | Banana | cytosol | 21.04 | 34.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P02410_001 | EnsemblPlants:GSMUA_Achr6T02410_001 | EnsemblPlantsGene:GSMUA_Achr6G02410_001 | Gene3D:3.40.30.10 | InterPro:Thioredoxin-like_fold | InterPro:Thioredoxin-like_sf |
| PANTHER:PTHR13871 | PANTHER:PTHR13871:SF57 | PFAM:PF13905 | SEG:seg | SUPFAM:SSF52833 | SUPFAM:SSF57889 |
| UniParc:UPI000296B2CE | UniProt:M0T3I9 | MapMan:10.6.3 | : | : | : |
Description
Putative Probable nucleoredoxin 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02410_001]
Coordinates
chr6:+:1554873..1558754
Molecular Weight (calculated)
74147.3 Da
IEP (calculated)
4.757
GRAVY (calculated)
-0.308
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MPWLAVPFAD SDTRERLHDH FGSFEEYYPA QLIIYDASIG MVVNEEGLRA VAKYGVNGYP FTVKRFYELE AAAKKERSLR SLLVSPSRDY LISNDGSKVA
101: VSDLEGKIVA FYFWYNIPDK YGRPNKLTLV LAEIYRKLKE AGESFEVVLV PLDDDKSSYE QGLASMPWLA IPFEDEGCEK LVRYFELWPF QLPTVLVIGA
201: DGKIMLKNYD RLISKYGVLA WEAFPFSKEQ LDLLPEKAKA AQTLESLLVA GDLDYVIGKE GLKVPVKELV GKTILFFFAM SDSFHCQKFL PKLIEAYHKI
301: KRMDSAFEVI FVPMGYMDSG AFEFFFRMPW LAVPVDDDRI GSLENTLEAH YVNTLVVIGP TGQTITKNAA TSLKMYGADA YPFSEERIKE VEMAQTLESL
401: LVAGDLDYVI GKEGLKVPVK ELVGKTILLF FSIRRSGTCR GFLTHLIEEY HKIKHMDSAF EVVNISMDKD QDSFEEFFSG MPWLSLPFGD ERKKSLKRTF
501: QADIIYPSLV AIGPTGRTST RNAMHSLATH GADAYPFSEE RIKELDQKID EMAKGWPEKR KHEQHKHGKL EWSCLHGLYM CRDCHKIGSG WCYLCSMCSF
601: GLHPKCAPKE EKKEEEEHDE GSECDGEVYN DFEDSEDSED SEDFEDSEDS E
101: VSDLEGKIVA FYFWYNIPDK YGRPNKLTLV LAEIYRKLKE AGESFEVVLV PLDDDKSSYE QGLASMPWLA IPFEDEGCEK LVRYFELWPF QLPTVLVIGA
201: DGKIMLKNYD RLISKYGVLA WEAFPFSKEQ LDLLPEKAKA AQTLESLLVA GDLDYVIGKE GLKVPVKELV GKTILFFFAM SDSFHCQKFL PKLIEAYHKI
301: KRMDSAFEVI FVPMGYMDSG AFEFFFRMPW LAVPVDDDRI GSLENTLEAH YVNTLVVIGP TGQTITKNAA TSLKMYGADA YPFSEERIKE VEMAQTLESL
401: LVAGDLDYVI GKEGLKVPVK ELVGKTILLF FSIRRSGTCR GFLTHLIEEY HKIKHMDSAF EVVNISMDKD QDSFEEFFSG MPWLSLPFGD ERKKSLKRTF
501: QADIIYPSLV AIGPTGRTST RNAMHSLATH GADAYPFSEE RIKELDQKID EMAKGWPEKR KHEQHKHGKL EWSCLHGLYM CRDCHKIGSG WCYLCSMCSF
601: GLHPKCAPKE EKKEEEEHDE GSECDGEVYN DFEDSEDSED SEDFEDSEDS E
001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
Arabidopsis Description
Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.