Factsheet for GSMUA_Achr9P11600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0794400-01	Rice	cytosol, extracellular	57.5	58.38
TraesCS3A01G327100.1	Wheat	cytosol	56.0	57.14
TraesCS3B01G356500.1	Wheat	cytosol	55.5	56.63
TraesCS3D01G320500.1	Wheat	cytosol	55.75	56.6
Zm00001d012591_P001	Maize	cytosol	56.25	56.53
EES01593	Sorghum	cytosol	55.75	56.46
HORVU3Hr1G077930.16	Barley	endoplasmic reticulum	54.0	54.41
VIT_18s0001g01030.t01	Wine grape	cytosol	53.0	49.88
KRH60996	Soybean	cytosol	49.75	47.04
Solyc04g081900.2.1	Tomato	cytosol	51.5	46.82
PGSC0003DMT400025576	Potato	cytosol	51.0	46.36
KRH51662	Soybean	cytosol	49.0	45.16
GSMUA_Achr2P15060_001	Banana	nucleus	12.0	36.92
GSMUA_Achr3P10290_001	Banana	cytosol	41.25	27.92
GSMUA_Achr6P02410_001	Banana	cytosol	34.25	21.04
GSMUA_Achr2P15050_001	Banana	cytosol	20.25	20.88

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	InterPro:DC1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0035556
GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr9G11600_001	EnsemblPlants:GSMUA_Achr9P11600_001	EnsemblPlants:GSMUA_Achr9T11600_001	InterPro:IPR002219	InterPro:IPR013766
UniProt:M0TZG9	InterPro:PE/DAG-bd	PFAM:PF03107	PFAM:PF13905	PFscan:PS50081	PFscan:PS51352
PANTHER:PTHR13871	PANTHER:PTHR13871:SF85	SUPFAM:SSF52833	SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI000295AE6D	:	:	:	:

Description

Probable nucleoredoxin 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11600_001]

Coordinates

chr9:-:7538362..7541296

Molecular Weight (calculated)

44819.8 Da

IEP (calculated)

5.642

GRAVY (calculated)

-0.185

Length

400 amino acids

Sequence
(BLAST)

001: MEAPTVTGVA SATGDGGLSA LLSTEFLICP SGNKVNPKDI EGKTIGLYFA ANWFQKCVSF TPVLVSVYHK LMEQELPFEI VFVSSDENQS SFEQFYSSMP
101: WPAVPFSDIN SKRSLSHKFQ IEGIPALIIL KPGGGLIQTE GVEILYRYGL QAFPFTSERI AELEAEEKRK YASQTLEKLL AISGKDHMIK RNDQKLQVTF
201: SSLVGKTVGL YFAAQWCPPC LKFTSRLMSI YNHLQERGEE FEVVFVSMDR DEAGFLQYFS GMPWLALPYG EESSKALARY FDIQEIPMLV IIGPDGKTVT
301: KGGRNLINLH MEMAYPFTEA HIRLLQEKMD EEAQRYPTSF KHDGHRHVLN LVSEKSGGGP YICCACDEQG LGWAYQCLAC GYEIHLKCGR EVKEDTGGRC

Best Arabidopsis Sequence Match ( AT1G60420.1 )
(BLAST)

001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA

Arabidopsis Description

Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.