Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G320500.1 | Wheat | cytosol | 95.15 | 94.67 |
| TraesCS3A01G327100.1 | Wheat | cytosol | 93.37 | 93.37 |
| HORVU3Hr1G077930.16 | Barley | endoplasmic reticulum | 87.24 | 86.15 |
| Os01t0794400-01 | Rice | cytosol, extracellular | 80.1 | 79.7 |
| EES01593 | Sorghum | cytosol | 77.81 | 77.22 |
| Zm00001d012591_P001 | Maize | cytosol | 76.53 | 75.38 |
| GSMUA_Achr9P11600_001 | Banana | cytosol | 56.63 | 55.5 |
| VIT_18s0001g01030.t01 | Wine grape | cytosol | 48.98 | 45.18 |
| KRH60996 | Soybean | cytosol | 45.15 | 41.84 |
| Solyc04g081900.2.1 | Tomato | cytosol | 46.43 | 41.36 |
| PGSC0003DMT400025576 | Potato | cytosol | 45.66 | 40.68 |
| KRH51662 | Soybean | cytosol | 43.62 | 39.4 |
| TraesCS2B01G489600.3 | Wheat | cytosol | 37.5 | 26.34 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G356500.1 | EnsemblPlantsGene:TraesCS3B01G356500 | Gene3D:3.40.30.10 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:DC1 | InterPro:IPR013766 | InterPro:Thioredoxin-like_fold | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| PANTHER:PTHR13871 | PANTHER:PTHR13871:SF85 | PFAM:PF03107 | PFAM:PF13905 | PFscan:PS51352 | SUPFAM:SSF52833 |
| SUPFAM:SSF57889 | MapMan:10.6.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:566830961..566833369
Molecular Weight (calculated)
42898.7 Da
IEP (calculated)
4.670
GRAVY (calculated)
-0.228
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEADGSGGG IRSVLPLGSL ISPSGNEVEL PELDGKIIGL YFAANWYPKC EAFTPALAAA YEQLRARGAG FEVVFVSCDE DRPSFERFHR AMPWPAVPFG
101: DLRCKKSLSD MFQVEGIPRL VVLAPGGAEV VCSDAVELVH RYGDPAFPFT PARVAELEAD ERSKFASQTL EKLFSVGHVN GGDEQVPISS LVGKTVGLYF
201: SAHRCEPCVK FTARLAAIYG NLKGKSAEFE VVYIPMDKEE DGYERSRGDM PWLALPYDGE GVPSRALARY FDVREIPTLV VIGPDGKTVT RDGRNLVNLY
301: FDMAFPFTEE QVRRQQELED EAAKGYAPSL RHAGHRHELS VVSEKSGGGP YVCCECDEQG FGWAYQCIAC GYEIHLRCGR DVEDGGAVGA GQ
101: DLRCKKSLSD MFQVEGIPRL VVLAPGGAEV VCSDAVELVH RYGDPAFPFT PARVAELEAD ERSKFASQTL EKLFSVGHVN GGDEQVPISS LVGKTVGLYF
201: SAHRCEPCVK FTARLAAIYG NLKGKSAEFE VVYIPMDKEE DGYERSRGDM PWLALPYDGE GVPSRALARY FDVREIPTLV VIGPDGKTVT RDGRNLVNLY
301: FDMAFPFTEE QVRRQQELED EAAKGYAPSL RHAGHRHELS VVSEKSGGGP YVCCECDEQG FGWAYQCIAC GYEIHLRCGR DVEDGGAVGA GQ
001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA
Arabidopsis Description
Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.