Factsheet for TraesCS2B01G489600.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G466800.2	Wheat	cytosol, golgi, unclear	97.49	94.28
TraesCS2A01G466800.1	Wheat	cytosol	86.56	92.18
HORVU2Hr1G103310.2	Barley	cytosol	93.19	90.12
Zm00001d029457_P001	Maize	extracellular	77.78	76.27
EER94707	Sorghum	cytosol	78.67	75.17
Os03t0405500-01	Rice	plasma membrane	75.27	73.81
Os03t0405900-01	Rice	cytosol, plastid	76.52	73.49
Zm00001d029459_P001	Maize	cytosol	68.64	66.03
OQU92417	Sorghum	cytosol	64.52	61.43
VIT_01s0127g00560.t01	Wine grape	cytosol	59.5	58.04
VIT_01s0127g00540.t01	Wine grape	mitochondrion	15.77	56.41
KRH45656	Soybean	cytosol, nucleus	56.99	55.79
VIT_01s0127g00520.t01	Wine grape	cytosol	56.27	55.09
AT1G60420.1	Thale cress	cytosol, nucleus, peroxisome	56.81	54.84
GSMUA_Achr3P10290_001	Banana	cytosol	58.06	54.82
VIT_01s0127g00590.t01	Wine grape	cytosol	55.91	54.45
PGSC0003DMT400079611	Potato	cytosol	55.73	53.9
Bra031513.1-P	Field mustard	cytosol	55.56	53.63
CDY60573	Canola	cytosol	55.56	53.63
CDY24527	Canola	cytosol	55.38	53.46
VIT_01s0127g00600.t01	Wine grape	cytosol	55.91	52.0
Solyc05g005460.2.1	Tomato	cytosol	53.94	51.81
TraesCS3B01G356500.1	Wheat	cytosol	26.34	37.5
VIT_01s0127g00530.t01	Wine grape	cytosol	23.66	16.36

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	ncoils:Coil	InterPro:DC1	GO:GO:0000003	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009605	GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987
GO:GO:0010183	GO:GO:0016043	GO:GO:0016049	GO:GO:0019725	GO:GO:0030154	GO:GO:0035556
GO:GO:0040007	GO:GO:0045454	GO:GO:0046686	GO:GO:0080092	InterPro:IPR002219	InterPro:IPR013766
InterPro:PE/DAG-bd	PFAM:PF03107	PFAM:PF13905	ScanProsite:PS00194	PFscan:PS50081	PFscan:PS51352
PANTHER:PTHR13871	PANTHER:PTHR13871:SF57	SUPFAM:SSF52833	SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS2B01G489600	EnsemblPlants:TraesCS2B01G489600.3	TIGR:cd03009	SEG:seg

Description

No Description!

Coordinates

chr2B:-:686834386..686838510

Molecular Weight (calculated)

61716.2 Da

IEP (calculated)

4.616

GRAVY (calculated)

-0.228

Length

558 amino acids

Sequence
(BLAST)

001: MAASSPTPGS GLGTILAAGD RDYLVRNSGE QVKISSIEGD TVAVYFSASW CPPCQRFTPK LIEAYKELTS HGKSFEVIFV SGDQDEEAFN AYFAKMPWLA
101: VPFSDSEGRK SLDERFEVNG IPHLVFLDAK TGEVLTDEGV EFVSEYGIEA YPFTAERIDE LKEQEKAAKD NQTIHSVLGT PNRNYVISNT GEKVPIVDLE
201: GKYVGICFVV NGYPPVVEFT PVLAKIYAKL KEVGEKFEVV AVSLDSDEES FNNSFSSMPW LAIPQGDKMC QKLVSYFELS DLPTLVLIGP DGKTLSSNIA
301: DIINEHGLDA WEGFPFNAEK LEILAEKAKA KAAAQTLESL LVTGDIDFVI GKDGAKVPVA ELVGKTVLLY FSAKWCGPCR AFLPTLVDVY NKVKEKNSDF
401: EIVFISSDRD QSSFDDFFSG MPWLAVPLED DRKAYLKKKF KIRGIPSLVA IGPDGKTVNT DAKTSLAVHG ADAFPFTSER IQELEKKIDE MAKGWPEKVK
501: HELHEHELVL IRRPRPYGCD GCEEMGTSWS YNCAECDFDL HTKCALGEEK KGDVCRKA

Best Arabidopsis Sequence Match ( AT1G60420.1 )
(BLAST)

001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA

Arabidopsis Description

Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.