Factsheet for HORVU2Hr1G103310.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G466800.2	Wheat	cytosol, golgi, unclear	94.11	94.11
TraesCS2A01G466800.1	Wheat	cytosol	85.1	93.7
TraesCS2B01G489600.3	Wheat	cytosol	90.12	93.19
Zm00001d029457_P001	Maize	extracellular	78.34	79.44
EER94707	Sorghum	cytosol	79.38	78.42
Os03t0405500-01	Rice	plasma membrane	75.39	76.45
Os03t0405900-01	Rice	cytosol, plastid	76.95	76.42
Zm00001d029459_P001	Maize	cytosol	68.46	68.1
OQU92417	Sorghum	cytosol	64.47	63.48
VIT_01s0127g00540.t01	Wine grape	mitochondrion	16.29	60.26
VIT_01s0127g00560.t01	Wine grape	cytosol	58.23	58.74
GSMUA_Achr3P10290_001	Banana	cytosol	57.37	56.01
KRH45656	Soybean	cytosol, nucleus	54.94	55.61
VIT_01s0127g00520.t01	Wine grape	cytosol	54.94	55.61
AT1G60420.1	Thale cress	cytosol, nucleus, peroxisome	54.94	54.84
VIT_01s0127g00590.t01	Wine grape	cytosol	54.42	54.8
PGSC0003DMT400079611	Potato	cytosol	54.59	54.59
Bra031513.1-P	Field mustard	cytosol	53.73	53.63
CDY60573	Canola	cytosol	53.73	53.63
CDY24527	Canola	cytosol	53.55	53.46
VIT_01s0127g00600.t01	Wine grape	cytosol	55.11	53.0
Solyc05g005460.2.1	Tomato	cytosol	53.03	52.67
HORVU3Hr1G077930.16	Barley	endoplasmic reticulum	25.3	36.78
VIT_01s0127g00530.t01	Wine grape	cytosol	22.53	16.11

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	ncoils:Coil	InterPro:DC1	GO:GO:0000003	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009605
GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987	GO:GO:0010183	GO:GO:0016043
GO:GO:0016049	GO:GO:0019725	GO:GO:0030154	GO:GO:0040007	GO:GO:0045454	GO:GO:0046686
GO:GO:0080092	EnsemblPlantsGene:HORVU2Hr1G103310	EnsemblPlants:HORVU2Hr1G103310.2	InterPro:IPR013766	UniProt:M0Z4F0	PFAM:PF03107
PFAM:PF13905	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF57	SUPFAM:SSF52833
SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002967C44
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:699753655..699757948

Molecular Weight (calculated)

63542.3 Da

IEP (calculated)

4.509

GRAVY (calculated)

-0.228

Length

577 amino acids

Sequence
(BLAST)

001: MAASPTPGGG GIGAILAAGD RDYLVRNSGE QVKISGIEGD TVALYFSASW CPPCRRFTPK LIEAYKELTS LGKSFEVVFV SGDQDEEAFN AYFAKMPWLA
101: VPFSDSEGRK NLDERFEVNG IPHLVFLDAK TGEVLTDEGV EFVSEYGIEA YPFTTERINE LKEQEKAAKD NQTIHSVLGT ANRAYVISNT GKEVPIVDLE
201: GKYVGICFVV NGYPLVEEFT SVLAKIYAKL KEVGEKFEVV AVSLDSDEES FNTSFSSMPW LAIPQGDKMC QKLVSYFELS DLPTLVLIGP DGKTLSSNIA
301: GIIDEHGLDA WEGFPFSAEK LEILAEKAKA KAASQTLESL LVTGDLDFVI GKDGAKVPVA ELVGKTVLLY FSAKWCGPCR AFLPTLVDVY NKIKEKNSDF
401: EIVFISSDKD QSSFDDFFSG MPWLAIPLED ERKADLKKRF KIRGIPSLVA IGPDGKTVNT DAKTSLAVHG ADAFPFTDER IEELEKKIDE MAKGWPEKLK
501: HELHEHELVL VRRRRPYGCD GCEEMGNSWS YNCAECDFDL HTKCALGEEK KGEEVKGQED AAAPAGYVCE GDVCRKA

Best Arabidopsis Sequence Match ( AT1G60420.1 )
(BLAST)

001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA

Arabidopsis Description

Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.