Factsheet for Zm00001d029459_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029457_P001	Maize	extracellular	77.76	79.26
EER94707	Sorghum	cytosol	76.72	76.2
TraesCS2B01G489600.3	Wheat	cytosol	66.03	68.64
HORVU2Hr1G103310.2	Barley	cytosol	68.1	68.46
TraesCS2A01G466800.1	Wheat	cytosol	61.55	68.13
TraesCS2D01G466800.2	Wheat	cytosol, golgi, unclear	67.59	67.94
Os03t0405500-01	Rice	plasma membrane	65.69	66.96
Os03t0405900-01	Rice	cytosol, plastid	66.21	66.09
VIT_01s0127g00560.t01	Wine grape	cytosol	52.07	52.8
VIT_01s0127g00540.t01	Wine grape	mitochondrion	13.79	51.28
KRH45656	Soybean	cytosol, nucleus	50.0	50.88
GSMUA_Achr3P10290_001	Banana	cytosol	51.72	50.76
VIT_01s0127g00520.t01	Wine grape	cytosol	49.66	50.53
VIT_01s0127g00590.t01	Wine grape	cytosol	49.66	50.26
AT1G60420.1	Thale cress	cytosol, nucleus, peroxisome	49.83	50.0
Bra031513.1-P	Field mustard	cytosol	49.48	49.65
CDY24527	Canola	cytosol	49.48	49.65
CDY60573	Canola	cytosol	49.14	49.31
PGSC0003DMT400079611	Potato	cytosol	47.24	47.49
VIT_01s0127g00600.t01	Wine grape	cytosol	48.28	46.67
Solyc05g005460.2.1	Tomato	cytosol	46.38	46.3
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	15.69	36.55
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	15.69	36.55
Zm00001d018942_P001	Maize	cytosol	20.17	36.34
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	18.1	35.12
Zm00001d012591_P001	Maize	cytosol	23.97	34.92
Zm00001d026266_P001	Maize	plastid	26.21	33.04
Zm00001d033946_P001	Maize	plastid	15.0	24.86
VIT_01s0127g00530.t01	Wine grape	cytosol	20.52	14.75

Protein Annotations

MapMan:10.6.3	EntrezGene:100191960	Gene3D:3.40.30.10	UniProt:B4FAT2	EMBL:BT034220	EMBL:BT042672
EMBL:BT064464	ncoils:Coil	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	ProteinID:ONL98794.1	PFAM:PF13905	PFscan:PS51352
PANTHER:PTHR13871	PANTHER:PTHR13871:SF57	SUPFAM:SSF52833	SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00017B62AA	EnsemblPlantsGene:Zm00001d029459	EnsemblPlants:Zm00001d029459_P001	EnsemblPlants:Zm00001d029459_T001	SEG:seg

Description

Probable nucleoredoxin 1

Coordinates

chr1:+:71770258..71773654

Molecular Weight (calculated)

65459.3 Da

IEP (calculated)

4.966

GRAVY (calculated)

-0.201

Length

580 amino acids

Sequence
(BLAST)

001: MAKAAPAAGG GIADILVTRD RDFLVRNSGE QVKISSIEAS PVAIYFSNSW FPPSRWFTPK LIQVYKQLAS EGKSFEVIFA WGDLKEKTFN EYFAKMPWLA
101: LPFSDIERRE ALDIRFKVTD TPHLVILDAK TGEVYTKDGV RIVSEYGVDA YPFTPDRINE LKELEKEEKE NQTIQIVLGT STRDYLISNK GDKVPISELE
201: GKYVGLFFVG VGYPPFIEFI DLLAKIYEKL KEVGEKFEVV AVSIYSEESS FNESFAKMPW LAIPHGDNKC LTLTRYFGFM SLPTLVLIGP DGKTLNNNVA
301: EIIIDHGFDV WEGFPFSAEK LDFLAEKVKV KAATQTLESL LISGHLDFVI GKDGVKVPVS ELVGKTVLLY FSSKWCGPSR GFLPTLVEAY SKIKEKNSDF
401: EVVFISHDRD QRSFDEYFSE MPWLAVPWED ERTAPLKTTF KARGFPILVV IGPNGKTVSW DATELLVVHG ADAFPFTEER LEELQKKVDE MAKAMGWPKK
501: LKHELHGEHE LVLQYRGTDT YACDRCVQMG SSWVYTCDCE ECDFDLHPKC ALRKKGEEEE TKSSTAGCYV CKGSDVCIKA

Best Arabidopsis Sequence Match ( AT1G60420.1 )
(BLAST)

001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA

Arabidopsis Description

Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.