Factsheet for Zm00001d018942_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	63.66	82.33
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	63.35	81.93
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	69.88	75.25
EES12823	Sorghum	cytosol	78.88	65.3
Zm00001d026266_P001	Maize	plastid	91.3	63.91
Os04t0608600-01	Rice	cytosol, peroxisome	37.89	61.31
Zm00001d033946_P001	Maize	plastid	62.42	57.43
VIT_04s0008g02900.t01	Wine grape	cytosol	47.2	38.1
CDX68729	Canola	cytosol	44.72	37.02
AT4G31240.2	Thale cress	cytosol	45.03	36.99
CDY28251	Canola	cytosol	44.72	36.92
Bra011254.1-P	Field mustard	cytosol	44.72	36.92
KRH52617	Soybean	cytosol	44.1	36.5
KRH61954	Soybean	cytosol	42.86	35.48
Zm00001d012591_P001	Maize	cytosol	32.92	26.63
Zm00001d029457_P001	Maize	extracellular	37.58	21.27
Zm00001d029459_P001	Maize	cytosol	36.34	20.17

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	UniProt:A0A1D6HTJ2	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	ProteinID:ONM51697.1	PFAM:PF13905
PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	SUPFAM:SSF52833	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0008441EAC	EnsemblPlantsGene:Zm00001d018942	EnsemblPlants:Zm00001d018942_P001	EnsemblPlants:Zm00001d018942_T001	SEG:seg

Description

Probable nucleoredoxin 3

Coordinates

chr7:+:10045261..10046707

Molecular Weight (calculated)

35605.0 Da

IEP (calculated)

6.967

GRAVY (calculated)

-0.044

Length

322 amino acids

Sequence
(BLAST)

001: MEGGEEVEKE GNMSQLAGVQ FLLSNEGKEV PLSSIEERTA CICLFFSAHW CRPCRSFTPT LLQAYTALRS AGKSVEIIFV SLDRDEASFR DHFQGMSWLA
101: VPFDAAGLLR QKLCVRFAIE RIPTLIPLSV SATPSSGLGC GEDAVRLVGE YGVDAYPFSA QRRRELESMD DARRGGGRLQ ELLGCEERDY VISADDIKIP
201: IADLAGKTVG LYFGAHWCPP CHVFTKQLKE VYNELKILRP GSFEVIFVSI DRSKGEFQAS MSSMPWLAIP YSDAARKKLT RIFAVKGILG LLILGKALKT
301: DVHRPELLPT YACPSPAPYS AR

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.