Factsheet for Zm00001d026266_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018942_P001	Maize	cytosol	63.91	91.3
EES12823	Sorghum	cytosol	72.39	85.6
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	46.09	85.14
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	55.22	84.95
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	45.87	84.74
Os04t0608600-01	Rice	cytosol, peroxisome	26.96	62.31
Zm00001d033946_P001	Maize	plastid	46.09	60.57
VIT_04s0008g02900.t01	Wine grape	cytosol	45.22	52.13
AT4G31240.2	Thale cress	cytosol	42.17	49.49
CDY28251	Canola	cytosol	41.74	49.23
Bra011254.1-P	Field mustard	cytosol	41.74	49.23
KRH52617	Soybean	cytosol	41.52	49.1
CDX68729	Canola	cytosol	41.52	49.1
KRH61954	Soybean	cytosol	41.09	48.59
Zm00001d012591_P001	Maize	cytosol	29.78	34.42
Zm00001d029457_P001	Maize	extracellular	33.7	27.24
Zm00001d029459_P001	Maize	cytosol	33.04	26.21

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	UniProt:A0A1D6JDX4	ProteinID:AQK46012.1	InterPro:DC1	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF03107	PFAM:PF13905	PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	SUPFAM:SSF52833
SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0008DB344D	EnsemblPlantsGene:Zm00001d026266
EnsemblPlants:Zm00001d026266_P001	EnsemblPlants:Zm00001d026266_T001	SEG:seg	:	:	:

Description

Probable nucleoredoxin 3

Coordinates

chr10:-:142373486..142375459

Molecular Weight (calculated)

51476.9 Da

IEP (calculated)

7.770

GRAVY (calculated)

-0.248

Length

460 amino acids

Sequence
(BLAST)

001: MLEYYSTNRT HNMPMPKMLS AYPYPTVAMA ILKTRSTSMF TTKPQNIDRF SCSIVSATRL YGRREMEGGE EVEKEGNMSQ LAGVQFLLSN EGKEVPLSSI
101: EDRTACLCLF FSAHWCRPCR SFTPTLLQAY TALRSAGKSV EIIFVSLDRD EASFRDHFQG MPWLAVPFDA AGLLRQKLCA RFAVERIPAL IPLSASATPS
201: SGLGSGEDAV RLVGEYGVDA YPFSAQRRRE LESMDDARRE GGRLQELLGC EERDYVISAD DIKIPIADLD GKTVGLYFGA HWCPPCHVFT KQLKEVYNEL
301: KILRPGSFEV IFVSIDRSKG EFQASMSSMP WLAIPYSDAA RKKLTRIFAV KGIPGLLILG LDGKVLKTDG RTAISTYGAA AFPFTESRVS EVGEALKREG
401: DKLPRRVNDP RHRHMLELDM AKAYVCDECQ QKGRYWVFSC KQCNFDLHPS CVGDNKVDNI

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.