Factsheet for Os04t0608600-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 2
peroxisome 1
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018942_P001	Maize	cytosol	61.31	37.89
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	45.23	36.14
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	44.72	35.74
EES12823	Sorghum	cytosol	67.84	34.7
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	46.73	31.1
Zm00001d033946_P001	Maize	plastid	50.75	28.86
Zm00001d026266_P001	Maize	plastid	62.31	26.96
VIT_04s0008g02900.t01	Wine grape	cytosol	47.24	23.56
AT4G31240.2	Thale cress	cytosol	42.71	21.68
KRH52617	Soybean	cytosol	42.21	21.59
CDX68729	Canola	cytosol	40.7	20.82
KRH61954	Soybean	cytosol	40.7	20.82
Bra011254.1-P	Field mustard	cytosol	40.2	20.51
CDY28251	Canola	cytosol	40.2	20.51
Os01t0794400-01	Rice	cytosol, extracellular	29.65	14.97
Os03t0405500-01	Rice	plasma membrane	35.68	12.48
Os03t0405900-01	Rice	cytosol, plastid	35.18	12.05

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	UniProt:A0A0P0WEX0	ProteinID:BAS90923.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0047134
GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlantsGene:Os04g0608600	EnsemblPlants:Os04t0608600-01	PFAM:PF13905
PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	SUPFAM:SSF52833	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0003939217	SEG:seg	:	:	:

Description

Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein. (Os04t0608600-01)

Coordinates

chr4:-:30806290..30808461

Molecular Weight (calculated)

23020.4 Da

IEP (calculated)

8.477

GRAVY (calculated)

0.019

Length

199 amino acids

Sequence
(BLAST)

001: LSPKFVIVYQ KQEIPLSSIE GKRICLFFSA HWCRPCRNFT PKLLQIYRKL RNTCKNMEII FISLDRDEIS FLDYFKGMPW LALPFDTGLR QKLCVQFDIE
101: HIPALIPLST TLSHGFRVEE DAVKLVEEYG VDAYPFGAKR RSELEGMDDA RRQGGNLLQL LGCKEREYVI SADGIKVTKI ITYKFVICLF MHCVCLGKI

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.