Factsheet for AT4G31240.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68729	Canola	cytosol	88.01	88.69
Bra011254.1-P	Field mustard	cytosol	87.5	87.95
CDY28251	Canola	cytosol	87.5	87.95
VIT_04s0008g02900.t01	Wine grape	cytosol	60.97	59.9
KRH52617	Soybean	cytosol	58.67	59.13
KRH61954	Soybean	cytosol	57.91	58.35
EES12823	Sorghum	cytosol	50.26	50.64
Zm00001d018942_P001	Maize	cytosol	36.99	45.03
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	33.93	44.48
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	28.06	44.18
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	28.06	44.18
Os04t0608600-01	Rice	cytosol, peroxisome	21.68	42.71
Zm00001d026266_P001	Maize	plastid	49.49	42.17
Zm00001d033946_P001	Maize	plastid	25.0	28.0
AT1G60420.1	Thale cress	cytosol, nucleus, peroxisome	40.56	27.51

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	EntrezGene:829251	UniProt:A0A178UWD6	ProteinID:AEE85880.1	ProteinID:AEE85881.1
ArrayExpress:AT4G31240	EnsemblPlantsGene:AT4G31240	RefSeq:AT4G31240	TAIR:AT4G31240	RefSeq:AT4G31240-TAIR-G	EnsemblPlants:AT4G31240.2
TAIR:AT4G31240.2	EMBL:AY063945	EMBL:AY096637	Unigene:At.27135	ProteinID:CAA16527.1	ProteinID:CAB79842.1
InterPro:DC1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0019725	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766
RefSeq:NP_001320100.1	RefSeq:NP_567869.1	ProteinID:OAO97820.1	PFAM:PF03107	PFAM:PF13905	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007103	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	UniProt:Q8VZQ0	SUPFAM:SSF52833	SUPFAM:SSF57889
InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00000A8E6B	:	:

Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]

Coordinates

chr4:-:15176455..15178849

Molecular Weight (calculated)

44965.0 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.191

Length

392 amino acids

Sequence
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.