CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61954	Soybean	cytosol	95.12	95.12
VIT_04s0008g02900.t01	Wine grape	cytosol	64.27	62.66
Bra011254.1-P	Field mustard	cytosol	59.38	59.23
CDY28251	Canola	cytosol	59.38	59.23
CDX68729	Canola	cytosol	59.13	59.13
AT4G31240.2	Thale cress	cytosol	59.13	58.67
EES12823	Sorghum	cytosol	51.16	51.16
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	33.93	44.15
Zm00001d018942_P001	Maize	cytosol	36.5	44.1
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	27.51	42.97
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	27.51	42.97
Os04t0608600-01	Rice	cytosol, peroxisome	21.59	42.21
Zm00001d026266_P001	Maize	plastid	49.1	41.52
KRH51662	Soybean	cytosol	36.76	32.95
KRH60996	Soybean	cytosol	35.73	32.86
Zm00001d033946_P001	Maize	plastid	25.96	28.86
KRH45656	Soybean	cytosol, nucleus	37.53	25.61

Protein Annotations

MapMan:10.6.3	EntrezGene:100778160	Gene3D:3.40.30.10	EMBL:ACUP02003425	InterPro:DC1	EnsemblPlantsGene:GLYMA_06G078100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	GO:GO:0098869
InterPro:IPR013766	UniProt:K7KTR5	ProteinID:KRH52616.1	EnsemblPlants:KRH52617	ProteinID:KRH52617	ProteinID:KRH52617.1
PFAM:PF03107	PFAM:PF13905	PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	SUPFAM:SSF52833
SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233A5D7	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:6046280..6049613

Molecular Weight (calculated)

44459.4 Da

IEP (calculated)

5.249

GRAVY (calculated)

-0.212

Length

389 amino acids

Sequence
(BLAST)

001: MAGLNFEATY TDNHDILKIF AAEGVEFLLS CEGKVPVSEC NGKIICLFFT ANWCRPCRAF IPRLVELYET LRKRGINLEI IFISFDRDED GFKEHFKNMP
101: WLAVPFDVSL HRRLIDRYRI DRIPSFVPLC SDGITIEEDL IGCIEDYGAD AFPFTRKRHE ELKAIDIRKR EEANLEELLG HKGCHFLISG DDRKVPISEL
201: AGKTIGLYFG AYWSPPCCAF TVQLTDAYNN LKVEKGDCFE IVLISTDRDL EEFNVNKSSM PWLAVPYEDR TRHDLRRIFD VKGIPALVLI GPDGKVISVN
301: GKLMVSSYGA EAFPFTESRI RDLEAALRKE GEALPQQVED VKHEHVLKLD MAKAYVCDSC KKQGKFWTFS CDVCDYDLHP SCLEKVNKD

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.