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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28251 Canola cytosol 97.69 97.44
AT4G31240.2 Thale cress cytosol 88.69 88.01
VIT_04s0008g02900.t01 Wine grape cytosol 62.47 60.9
KRH52617 Soybean cytosol 59.13 59.13
KRH61954 Soybean cytosol 58.61 58.61
EES12823 Sorghum cytosol 48.33 48.33
Zm00001d018942_P001 Maize cytosol 37.02 44.72
Zm00001d011007_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 28.02 43.78
Zm00001d021986_P001 Maize endoplasmic reticulum, plasma membrane 28.02 43.78
Zm00001d018769_P001 Maize endoplasmic reticulum, plasma membrane 33.42 43.48
Zm00001d026266_P001 Maize plastid 49.1 41.52
Os04t0608600-01 Rice cytosol, peroxisome 20.82 40.7
Zm00001d033946_P001 Maize plastid 24.68 27.43
CDY24527 Canola cytosol 40.1 26.99
CDY60573 Canola cytosol 39.85 26.82
Protein Annotations
MapMan:10.6.3Gene3D:3.40.30.10GO:A0A078BXY7EnsemblPlants:CDX68729ProteinID:CDX68729ProteinID:CDX68729.1
InterPro:DC1GO:GO:0008150GO:GO:0009987GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00130421001
InterPro:IPR013766PFAM:PF03107PFAM:PF13905PFscan:PS51352PANTHER:PTHR13871PANTHER:PTHR13871:SF81
SUPFAM:SSF52833SUPFAM:SSF57889InterPro:Thioredoxin-like_foldInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI0004EE2A51
SEG:seg:::::
Description
BnaC01g07240D
Coordinates
chrLK031789:-:993891..995341
Molecular Weight (calculated)
44756.5 Da
IEP (calculated)
5.229
GRAVY (calculated)
-0.268
Length
389 amino acids
Sequence
(BLAST)
001: MAVTADYQVQ FPENDDIYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SANWCRPCKD FTPELVKLYE SLQKRGEEIE IIFVSFDHDM TLFYEHFWSM
101: PWLAVPFSLS LRNKLTDKYR VARIPSLVPL YPDEISVADD VIGLIEDYGP EAFPFTKKRK EELKAIDDSK RVGGQLEKLL THETRSYVVS RNGSKVLVSD
201: LVGKTIGLYF GAHWCPPFRS FTSQLIDVYN ELTTSTKGSF EVILVSTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NIKLIPALVI IGPEEKTVCT
301: NAREMVSLYG SRSYPFTESR IVELEACLKK EGDSFPRKVK DKKHDHELKL DMAKGYVCDF CKKQGKFWAF SCDACDYDLH PTCVEGHEE
Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)
001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV
Arabidopsis Description
Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.