Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY28251 | Canola | cytosol | 97.69 | 97.44 |
AT4G31240.2 | Thale cress | cytosol | 88.69 | 88.01 |
VIT_04s0008g02900.t01 | Wine grape | cytosol | 62.47 | 60.9 |
KRH52617 | Soybean | cytosol | 59.13 | 59.13 |
KRH61954 | Soybean | cytosol | 58.61 | 58.61 |
EES12823 | Sorghum | cytosol | 48.33 | 48.33 |
Zm00001d018942_P001 | Maize | cytosol | 37.02 | 44.72 |
Zm00001d011007_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 28.02 | 43.78 |
Zm00001d021986_P001 | Maize | endoplasmic reticulum, plasma membrane | 28.02 | 43.78 |
Zm00001d018769_P001 | Maize | endoplasmic reticulum, plasma membrane | 33.42 | 43.48 |
Zm00001d026266_P001 | Maize | plastid | 49.1 | 41.52 |
Os04t0608600-01 | Rice | cytosol, peroxisome | 20.82 | 40.7 |
Zm00001d033946_P001 | Maize | plastid | 24.68 | 27.43 |
CDY24527 | Canola | cytosol | 40.1 | 26.99 |
CDY60573 | Canola | cytosol | 39.85 | 26.82 |
Protein Annotations
MapMan:10.6.3 | Gene3D:3.40.30.10 | GO:A0A078BXY7 | EnsemblPlants:CDX68729 | ProteinID:CDX68729 | ProteinID:CDX68729.1 |
InterPro:DC1 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00130421001 |
InterPro:IPR013766 | PFAM:PF03107 | PFAM:PF13905 | PFscan:PS51352 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF81 |
SUPFAM:SSF52833 | SUPFAM:SSF57889 | InterPro:Thioredoxin-like_fold | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EE2A51 |
SEG:seg | : | : | : | : | : |
Description
BnaC01g07240D
Coordinates
chrLK031789:-:993891..995341
Molecular Weight (calculated)
44756.5 Da
IEP (calculated)
5.229
GRAVY (calculated)
-0.268
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTADYQVQ FPENDDIYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SANWCRPCKD FTPELVKLYE SLQKRGEEIE IIFVSFDHDM TLFYEHFWSM
101: PWLAVPFSLS LRNKLTDKYR VARIPSLVPL YPDEISVADD VIGLIEDYGP EAFPFTKKRK EELKAIDDSK RVGGQLEKLL THETRSYVVS RNGSKVLVSD
201: LVGKTIGLYF GAHWCPPFRS FTSQLIDVYN ELTTSTKGSF EVILVSTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NIKLIPALVI IGPEEKTVCT
301: NAREMVSLYG SRSYPFTESR IVELEACLKK EGDSFPRKVK DKKHDHELKL DMAKGYVCDF CKKQGKFWAF SCDACDYDLH PTCVEGHEE
101: PWLAVPFSLS LRNKLTDKYR VARIPSLVPL YPDEISVADD VIGLIEDYGP EAFPFTKKRK EELKAIDDSK RVGGQLEKLL THETRSYVVS RNGSKVLVSD
201: LVGKTIGLYF GAHWCPPFRS FTSQLIDVYN ELTTSTKGSF EVILVSTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NIKLIPALVI IGPEEKTVCT
301: NAREMVSLYG SRSYPFTESR IVELEACLKK EGDSFPRKVK DKKHDHELKL DMAKGYVCDF CKKQGKFWAF SCDACDYDLH PTCVEGHEE
001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV
Arabidopsis Description
Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.