Factsheet for Zm00001d021986_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	99.2	99.2
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	94.78	78.93
Zm00001d018942_P001	Maize	cytosol	81.93	63.35
EES12823	Sorghum	cytosol	73.49	47.04
Zm00001d033946_P001	Maize	plastid	65.06	46.29
Zm00001d026266_P001	Maize	plastid	84.74	45.87
Os04t0608600-01	Rice	cytosol, peroxisome	35.74	44.72
VIT_04s0008g02900.t01	Wine grape	cytosol	45.38	28.32
AT4G31240.2	Thale cress	cytosol	44.18	28.06
CDX68729	Canola	cytosol	43.78	28.02
CDY28251	Canola	cytosol	43.78	27.95
Bra011254.1-P	Field mustard	cytosol	43.78	27.95
KRH52617	Soybean	cytosol	42.97	27.51
KRH61954	Soybean	cytosol	41.77	26.74
Zm00001d012591_P001	Maize	cytosol	32.53	20.35
Zm00001d029457_P001	Maize	extracellular	38.55	16.87
Zm00001d029459_P001	Maize	cytosol	36.55	15.69

Protein Annotations

MapMan:10.6.3	EntrezGene:103634367	Gene3D:3.40.30.10	UniProt:A0A1D6IIA6	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0045454
InterPro:IPR013766	ProteinID:ONM59219.1	PFAM:PF13905	PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF81
SUPFAM:SSF52833	TMHMM:TMhelix	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0004DEB93F
EnsemblPlantsGene:Zm00001d021986	EnsemblPlants:Zm00001d021986_P001	EnsemblPlants:Zm00001d021986_T001	SEG:seg	:	:

Description

Probable nucleoredoxin 3

Coordinates

chr7:-:167552282..167553310

Molecular Weight (calculated)

28090.9 Da

IEP (calculated)

4.679

GRAVY (calculated)

0.103

Length

249 amino acids

Sequence
(BLAST)

001: MLQLLFEDLN VNNGVSVCLL LVYVCYSCWI SCFIFWDVEI IFVSLDRDEA SFRDHFQGMP WLAVPFDAAG LLRQKLCARF AIERIPALIP LSASVTSSSG
101: LGCGEDSVRL VGEYGVDAYP FSAQRRELES MDDARREGGR LQELLGCEER DFVISADDIK IPIADLTGKT VGLYFGAHWC PPCHVFTKQL KEVYNELKIL
201: RPGSFEVIFV SIDRSKGEFQ ASMSSMPWLA IPYSDAARKR LIMKETNFD

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.