CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018942_P001	Maize	cytosol	65.3	78.88
Zm00001d018769_P001	Maize	endoplasmic reticulum, plasma membrane	58.35	75.92
Zm00001d011007_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	47.3	73.9
Zm00001d021986_P001	Maize	endoplasmic reticulum, plasma membrane	47.04	73.49
Zm00001d026266_P001	Maize	plastid	85.6	72.39
Os04t0608600-01	Rice	cytosol, peroxisome	34.7	67.84
VIT_04s0008g02900.t01	Wine grape	cytosol	55.53	54.14
KRH52617	Soybean	cytosol	51.16	51.16
Zm00001d033946_P001	Maize	plastid	45.76	50.86
AT4G31240.2	Thale cress	cytosol	50.64	50.26
KRH61954	Soybean	cytosol	49.36	49.36
Bra011254.1-P	Field mustard	cytosol	48.59	48.46
CDY28251	Canola	cytosol	48.59	48.46
CDX68729	Canola	cytosol	48.33	48.33
EES01593	Sorghum	cytosol	32.9	32.41
EER94707	Sorghum	cytosol	38.3	25.51
OQU92417	Sorghum	cytosol	35.99	23.89

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	EntrezGene:8072312	UniProt:C5YFK6	InterPro:DC1	EnsemblPlants:EES12823
ProteinID:EES12823	ProteinID:EES12823.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	GO:GO:0098869	InterPro:IPR013766	PFAM:PF03107	PFAM:PF13905	PFscan:PS51352
PANTHER:PTHR13871	PANTHER:PTHR13871:SF81	EnsemblPlantsGene:SORBI_3006G208600	SUPFAM:SSF52833	SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A8753E	RefSeq:XP_002448495.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:55860682..55863314

Molecular Weight (calculated)

43812.6 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.258

Length

389 amino acids

Sequence
(BLAST)

001: MEGDGEAKKE VNMSQLAGVQ FLLNNEGKEV PLSSIEGKTT CLFFSAHWCR PCRSFTPNLV QIYTALRNTG KNIEIIFISL DHDEASFWDH FKGMSWLALP
101: FDTGLSQKLC AHFGIEHIPA LIPLSATPSS GVGFEEDAVR LVDEYGEDAY PFSAQRRREL EAMDDARRKG GKLQELLGCK ERDYVISADD IKIPIADLTG
201: KTVGLYFGAH WCPPCHVFTK QLKEVYNELK ILRPESFEVI FISIDRNKGE FQASMSSMPW LAIPYSDTAR QKLTRIFAVK GIPGLLILGL DGKVLKTDGR
301: TAISTYGATA FPFTESRVSE VDEALRKEGD KLPRQVNDPK HRHVLELDMA KAYVCDECQK KGRYWVFSCK QCNFDLHPSC VLENKIDII

Best Arabidopsis Sequence Match ( AT4G31240.1 )
(BLAST)

001: MAVSADYQVK FPESGDLYSI LAAEGIEFLL SHSGEVPLEY IHGKTICLFF SAIWCRPCKD FTPELIKLYE NLQNRGEELE IIFVSFDHDM TSFYEHFWCM
101: PWLAVPFNLS LLNKLRDKYG ISRIPSLVPL YSDEISVAED VIGLIEDYGS EAFPFTKKRK EELKAIDDSK RLGGQLEKLL THESRNYVVA RNGSKVLVSK
201: LVGKTIGLYF GAHWCPPFRS FTSQLVDVYN ELATTDKGSF EVILISTDRD SREFNINMTN MPWLAIPYED RTRQDLCRIF NVKLIPALVI IGPEEKTVTT
301: NAREMVSLYG SRSFPFTESR IVELKACLKK EGDSLPRKVK DNKHEHELKL DMAKAYVCDF CKKQGRFWAF SCNACDYDLH PTCVEEEEAL LV

Arabidopsis Description

Probable nucleoredoxin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.