Factsheet for HORVU3Hr1G077930.16

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G327100.1	Wheat	cytosol	86.15	87.24
TraesCS3B01G356500.1	Wheat	cytosol	86.15	87.24
TraesCS3D01G320500.1	Wheat	cytosol	85.39	86.04
Os01t0794400-01	Rice	cytosol, extracellular	73.8	74.37
EES01593	Sorghum	cytosol	70.53	70.89
Zm00001d012591_P001	Maize	cytosol	70.03	69.85
GSMUA_Achr9P11600_001	Banana	cytosol	54.41	54.0
VIT_18s0001g01030.t01	Wine grape	cytosol	47.1	44.0
KRH60996	Soybean	cytosol	43.83	41.13
Solyc04g081900.2.1	Tomato	cytosol	44.58	40.23
PGSC0003DMT400025576	Potato	cytosol	43.83	39.55
KRH51662	Soybean	cytosol	42.07	38.48
HORVU2Hr1G103310.2	Barley	cytosol	36.78	25.3

Protein Annotations

MapMan:10.6.3	Gene3D:3.40.30.10	UniProt:A0A287LSY9	InterPro:DC1	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:HORVU3Hr1G077930	EnsemblPlants:HORVU3Hr1G077930.16
InterPro:IPR013766	PFAM:PF03107	PFAM:PF13905	PFscan:PS51352	PANTHER:PTHR13871	PANTHER:PTHR13871:SF57
SUPFAM:SSF52833	SUPFAM:SSF57889	InterPro:Thioredoxin-like_fold	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000B482BFD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:575251628..575253077

Molecular Weight (calculated)

44001.1 Da

IEP (calculated)

5.661

GRAVY (calculated)

-0.285

Length

397 amino acids

Sequence
(BLAST)

001: RVYPKKKSPH IYTAFFSGAL FLSSLSCHHF SQVELPELEG KTIGLYFAAN WYPKCEAFTP ALAAAYRQLR GRGAGFEVVF VSCDEDRPSF ERFHRAMPWP
101: AVPFGDIPCK KSLSDMFQVE GIPRLVVLAP DGAEVVCSDA VELVHRYGDP AFPFTPARVA ELEAAERSKF ASQTLDKLFS VSHVKNGGDQ QVPIASLVGK
201: TVGLYFSADG CEPCVKFTER LAAIYGNLKR RSAEFEVVYI PMDKEEGGYE RSRGDMPWPA LPYDGGEGAP SRELARYFDV REIPTLVVIG PDGKTVTREG
301: RNLVNLYFDM AFPFTEEQVR RLQELEDERA KGYSPSLRHA GHRHELSVVS EKSGGGPYVC CECDEQGFGW AYQCIACGYE IHLRCGRDGE DGGAVGA

Best Arabidopsis Sequence Match ( AT1G60420.1 )
(BLAST)

001: MAETSKQVNG DDAQDLHSLL SSPARDFLVR NDGEQVKVDS LLGKKIGLYF SAAWCGPCQR FTPQLVEVYN ELSSKVGFEI VFVSGDEDEE SFGDYFRKMP
101: WLAVPFTDSE TRDRLDELFK VRGIPNLVMV DDHGKLVNEN GVGVIRSYGA DAYPFTPEKM KEIKEDEDRA RRGQTLRSVL VTPSRDFVIS PDGNKVPVSE
201: LEGKTIGLLF SVASYRKCTE LTPKLVEFYT KLKENKEDFE IVLISLEDDE ESFNQDFKTK PWLALPFNDK SGSKLARHFM LSTLPTLVIL GPDGKTRHSN
301: VAEAIDDYGV LAYPFTPEKF QELKELEKAK VEAQTLESLL VSGDLNYVLG KDGAKVLVSD LVGKTILMYF SAHWCPPCRA FTPKLVEVYK QIKERNEAFE
401: LIFISSDRDQ ESFDEYYSQM PWLALPFGDP RKASLAKTFK VGGIPMLAAL GPTGQTVTKE ARDLVVAHGA DAYPFTEERL KEIEAKYDEI AKDWPKKVKH
501: VLHEEHELEL TRVQVYTCDK CEEEGTIWSY HCDECDFDLH AKCALNEDTK ENGDEAVKVG GDESKDGWVC EGNVCTKA

Arabidopsis Description

Probable nucleoredoxin 1 [Source:UniProtKB/Swiss-Prot;Acc:O80763]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.