Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P07410_001 Banana nucleus 77.17 76.34
TraesCS4B01G287900.1 Wheat nucleus 76.09 76.09
GSMUA_Achr2P14910_001 Banana mitochondrion 76.09 76.09
TraesCS4D01G286600.1 Wheat nucleus 75.0 75.0
TraesCS4A01G016300.1 Wheat nucleus 75.0 75.0
Os03t0171300-01 Rice nucleus 73.91 73.91
GSMUA_AchrUn_... Banana mitochondrion 73.91 73.12
GSMUA_Achr10P... Banana mitochondrion 72.83 72.83
GSMUA_Achr3P01580_001 Banana cytosol, mitochondrion, nucleus, plastid 72.83 72.83
OQU93146 Sorghum nucleus 71.74 71.74
Zm00001d027855_P001 Maize nucleus 70.65 70.65
Os10t0404300-00 Rice plastid 68.48 69.23
GSMUA_Achr6P02760_001 Banana plastid 63.04 68.24
EER94274 Sorghum mitochondrion 69.57 67.37
GSMUA_Achr7P17970_001 Banana nucleus 61.96 67.06
GSMUA_Achr9P09010_001 Banana nucleus 61.96 67.06
GSMUA_Achr5P23360_001 Banana nucleus 60.87 65.88
GSMUA_Achr1P21650_001 Banana nucleus 60.87 65.88
GSMUA_Achr10P... Banana nucleus 63.04 65.17
GSMUA_Achr6P35370_001 Banana nucleus 59.78 64.71
GSMUA_Achr8P17980_001 Banana nucleus 60.87 64.37
GSMUA_Achr4P00530_001 Banana mitochondrion 64.13 64.13
GSMUA_Achr2P07400_001 Banana nucleus 58.7 62.79
GSMUA_Achr5P17560_001 Banana nucleus 57.61 62.35
GSMUA_Achr4P24120_001 Banana nucleus 57.61 62.35
GSMUA_Achr7P11580_001 Banana nucleus 60.87 61.54
GSMUA_Achr6P30660_001 Banana nucleus 56.52 61.18
GSMUA_Achr2P14930_001 Banana nucleus 56.52 60.47
GSMUA_Achr3P19950_001 Banana cytosol, mitochondrion, nucleus, plastid 53.26 57.65
GSMUA_Achr10P... Banana nucleus 48.91 52.94
GSMUA_Achr11P... Banana cytosol 39.13 48.0
HORVU4Hr1G075250.41 Barley plastid 70.65 47.79
Protein Annotations
EnsemblPlants:GSMUA_Achr3P21440_001EnsemblPlants:GSMUA_Achr3T21440_001EnsemblPlantsGene:GSMUA_Achr3G21440_001Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR12565PANTHER:PTHR12565:SF172PFAM:PF00010PFscan:PS50888SEG:seg
SUPFAM:SSF47459UniParc:UPI00029625F2UniProt:M0SGL0MapMan:15.5.32::
Description
Transcription factor bHLH135 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21440_001]
Coordinates
chr3:-:22413551..22413905
Molecular Weight (calculated)
10391.4 Da
IEP (calculated)
9.648
GRAVY (calculated)
-0.564
Length
92 amino acids
Sequence
(BLAST)
1: MSSRRSRLRQ SGSTRITDEQ INELISKLQS VLPEARRGGN DRVSAAKVLQ ETCSHIRRLH REVDDLSERL SELLDSADLN SAQAAFIRSL LM
Best Arabidopsis Sequence Match ( AT3G47710.1 )
(BLAST)
1: MSSRKSRSRQ TGASMITDEQ INDLVLQLHR LLPELANNRR SGKVSASRVL QETCSYIRNL SKEVDDLSER LSQLLESTDS AQAALIRSLL MQ
Arabidopsis Description
PRE4Transcription factor PRE4 [Source:UniProtKB/Swiss-Prot;Acc:F4JCN9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.